PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold210352380 Alkaloid PMT low borderline
HhamSuperscaffold220386160 Alkaloid PMT medium pass
HhamSuperscaffold220386180 Alkaloid PMT low borderline
HhamSuperscaffold220386190 Alkaloid PMT low borderline
HhamSuperscaffold240435210 Alkaloid PMT low borderline
HhamSuperscaffold250442540 Alkaloid PMT medium borderline
HhamSuperscaffold290516490 Alkaloid PMT low borderline
HhamSuperscaffold30547970 Alkaloid PMT medium pass
HhamSuperscaffold30553180 Alkaloid PMT low borderline
HhamSuperscaffold30561340 Alkaloid PMT medium borderline
HhamSuperscaffold310602760 Alkaloid PMT medium borderline
HhamSuperscaffold330650780 Alkaloid PMT low borderline
HhamSuperscaffold330650840 Alkaloid PMT low borderline
HhamSuperscaffold340666030 Alkaloid PMT medium pass
HhamSuperscaffold340666040 Alkaloid PMT medium pass
HhamSuperscaffold350677610 Alkaloid PMT low borderline
HhamSuperscaffold380731200 Alkaloid PMT low borderline
HhamSuperscaffold390734250 Alkaloid PMT medium borderline
HhamSuperscaffold400786770 Alkaloid PMT medium pass
HhamSuperscaffold400786780 Alkaloid PMT medium pass
HhamSuperscaffold40751380 Alkaloid PMT medium borderline
HhamSuperscaffold40761520 Alkaloid PMT low borderline
HhamSuperscaffold410802080 Alkaloid PMT medium borderline
HhamSuperscaffold440853150 Alkaloid PMT medium pass
HhamSuperscaffold50889440 Alkaloid PMT low borderline
HhamSuperscaffold50889450 Alkaloid PMT low borderline
HhamSuperscaffold60926720 Alkaloid PMT low borderline
HhamSuperscaffold60930280 Alkaloid PMT low borderline
HhamSuperscaffold60947750 Alkaloid PMT medium pass
HhamSuperscaffold60952180 Alkaloid PMT medium borderline
HhamSuperscaffold70978360 Alkaloid PMT medium borderline
HhamSuperscaffold70982050 Alkaloid PMT low borderline
HhamSuperscaffold80996670 Alkaloid PMT medium pass
HhamSuperscaffold91030670 Alkaloid PMT medium borderline
HhamSuperscaffold91045050 Alkaloid PMT low borderline
HhamSuperscaffold91048480 Alkaloid PMT low borderline
HhamSuperscaffold10001060 Alkaloid PYKS low borderline
HhamSuperscaffold10005950 Alkaloid PYKS low borderline
HhamSuperscaffold10028680 Alkaloid PYKS low borderline
HhamSuperscaffold10031380 Alkaloid PYKS high pass
HhamSuperscaffold110090080 Alkaloid PYKS high pass
HhamSuperscaffold120103740 Alkaloid PYKS low borderline
HhamSuperscaffold120116310 Alkaloid PYKS low borderline
HhamSuperscaffold120121570 Alkaloid PYKS low borderline
HhamSuperscaffold120127050 Alkaloid PYKS low borderline
HhamSuperscaffold130135770 Alkaloid PYKS high pass
HhamSuperscaffold130149160 Alkaloid PYKS low borderline
HhamSuperscaffold130154710 Alkaloid PYKS low borderline
HhamSuperscaffold140161820 Alkaloid PYKS low borderline
HhamSuperscaffold140174310 Alkaloid PYKS low borderline