PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold10031880 Alkaloid T3O medium pass
HhamSuperscaffold10032000 Alkaloid T3O medium pass
HhamSuperscaffold10033900 Alkaloid T3O medium borderline
HhamSuperscaffold10033940 Alkaloid T3O medium borderline
HhamSuperscaffold10040610 Alkaloid T3O medium borderline
HhamSuperscaffold10040620 Alkaloid T3O medium pass
HhamSuperscaffold10040790 Alkaloid T3O low borderline
HhamSuperscaffold10042630 Alkaloid T3O medium borderline
HhamSuperscaffold10044460 Alkaloid T3O medium borderline
HhamSuperscaffold10044490 Alkaloid T3O medium borderline
HhamSuperscaffold10046110 Alkaloid T3O medium borderline
HhamSuperscaffold110085240 Alkaloid T3O low borderline
HhamSuperscaffold110086220 Alkaloid T3O low borderline
HhamSuperscaffold110087450 Alkaloid T3O medium borderline
HhamSuperscaffold110089470 Alkaloid T3O medium pass
HhamSuperscaffold110093450 Alkaloid T3O medium borderline
HhamSuperscaffold110095360 Alkaloid T3O medium pass
HhamSuperscaffold120100320 Alkaloid T3O low borderline
HhamSuperscaffold120100720 Alkaloid T3O low borderline
HhamSuperscaffold120104070 Alkaloid T3O medium borderline
HhamSuperscaffold120104100 Alkaloid T3O medium borderline
HhamSuperscaffold120104400 Alkaloid T3O medium pass
HhamSuperscaffold120111890 Alkaloid T3O medium borderline
HhamSuperscaffold120115330 Alkaloid T3O medium borderline
HhamSuperscaffold120115400 Alkaloid T3O medium borderline
HhamSuperscaffold120116050 Alkaloid T3O medium borderline
HhamSuperscaffold120118830 Alkaloid T3O low borderline
HhamSuperscaffold130132310 Alkaloid T3O medium borderline
HhamSuperscaffold130132630 Alkaloid T3O medium borderline
HhamSuperscaffold130132640 Alkaloid T3O medium borderline
HhamSuperscaffold130139060 Alkaloid T3O medium borderline
HhamSuperscaffold130142310 Alkaloid T3O medium borderline
HhamSuperscaffold130146050 Alkaloid T3O low borderline
HhamSuperscaffold130148540 Alkaloid T3O medium pass
HhamSuperscaffold130150240 Alkaloid T3O low borderline
HhamSuperscaffold130150590 Alkaloid T3O low borderline
HhamSuperscaffold140155950 Alkaloid T3O medium borderline
HhamSuperscaffold140157820 Alkaloid T3O medium borderline
HhamSuperscaffold140157860 Alkaloid T3O low borderline
HhamSuperscaffold140158240 Alkaloid T3O medium borderline
HhamSuperscaffold140165260 Alkaloid T3O medium pass
HhamSuperscaffold140166450 Alkaloid T3O medium borderline
HhamSuperscaffold140167500 Alkaloid T3O medium borderline
HhamSuperscaffold140168540 Alkaloid T3O medium borderline
HhamSuperscaffold140170700 Alkaloid T3O medium borderline
HhamSuperscaffold140171700 Alkaloid T3O medium borderline
HhamSuperscaffold150184490 Alkaloid T3O medium borderline
HhamSuperscaffold150185850 Alkaloid T3O medium borderline
HhamSuperscaffold150188610 Alkaloid T3O medium pass
HhamSuperscaffold150189130 Alkaloid T3O medium borderline