PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold450873830 Alkaloid TRI/TRII medium pass
HhamSuperscaffold460882490 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50901140 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50901170 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50901180 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50902600 Alkaloid TRI/TRII medium pass
HhamSuperscaffold50916310 Alkaloid TRI/TRII low borderline
HhamSuperscaffold50920330 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928560 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928570 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928580 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60928590 Alkaloid TRI/TRII medium pass
HhamSuperscaffold60959310 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70962690 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70965310 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70966530 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70966550 Alkaloid TRI/TRII medium pass
HhamSuperscaffold70995640 Alkaloid TRI/TRII medium pass
HhamSuperscaffold81000640 Alkaloid TRI/TRII medium pass
HhamSuperscaffold81016940 Alkaloid TRI/TRII low borderline
HhamSuperscaffold91038220 Alkaloid TRI/TRII medium pass
HhamSuperscaffold91050040 Alkaloid TRI/TRII medium pass
Hhamunanchor2731061640 Alkaloid TRI/TRII medium pass
Hhamunanchor581068560 Alkaloid TRI/TRII medium pass
HhamSuperscaffold10028280 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold10029870 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold220379930 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold220386560 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold220386580 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold250451120 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold250458160 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold300597300 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold30581390 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold340660120 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold380716300 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold400786400 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold400792360 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold40761770 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold420824430 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold70986260 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold81022920 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold81022930 Alkaloid TYDC_DDC medium borderline
HhamSuperscaffold100055460 Alkaloid XMT_MXMT_DXMT medium borderline
HhamSuperscaffold10041280 Alkaloid XMT_MXMT_DXMT medium borderline
HhamSuperscaffold200341510 Alkaloid XMT_MXMT_DXMT low borderline
HhamSuperscaffold310617040 Alkaloid XMT_MXMT_DXMT low borderline
HhamSuperscaffold340668620 Alkaloid XMT_MXMT_DXMT medium borderline
HhamSuperscaffold400784400 Alkaloid XMT_MXMT_DXMT medium borderline
HhamSuperscaffold440857960 Alkaloid XMT_MXMT_DXMT medium borderline
HhamSuperscaffold60954940 Alkaloid XMT_MXMT_DXMT medium borderline