PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
HhamSuperscaffold70985260 Alkaloid 7DLGT low borderline
HhamSuperscaffold70993850 Alkaloid 7DLGT low borderline
HhamSuperscaffold81010410 Alkaloid 7DLGT low borderline
HhamSuperscaffold81010460 Alkaloid 7DLGT medium pass
HhamSuperscaffold81023280 Alkaloid 7DLGT medium pass
HhamSuperscaffold91027870 Alkaloid 7DLGT medium pass
HhamSuperscaffold91028040 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028050 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028060 Alkaloid 7DLGT low borderline
HhamSuperscaffold91028070 Alkaloid 7DLGT low borderline
HhamSuperscaffold91033760 Alkaloid 7DLGT medium pass
HhamSuperscaffold91036750 Alkaloid 7DLGT low borderline
HhamSuperscaffold91038430 Alkaloid 7DLGT medium pass
HhamSuperscaffold91049040 Alkaloid 7DLGT low borderline
HhamSuperscaffold91049050 Alkaloid 7DLGT medium pass
HhamSuperscaffold91053210 Alkaloid 7DLGT low borderline
HhamSuperscaffold91053220 Alkaloid 7DLGT low borderline
HhamSuperscaffold91053230 Alkaloid 7DLGT low borderline
Hhamunanchor1171056400 Alkaloid 7DLGT high pass
HhamSuperscaffold100064700 Alkaloid 7DLH medium borderline
HhamSuperscaffold100069820 Alkaloid 7DLH medium borderline
HhamSuperscaffold10013100 Alkaloid 7DLH medium pass
HhamSuperscaffold10015250 Alkaloid 7DLH low borderline
HhamSuperscaffold10037110 Alkaloid 7DLH low borderline
HhamSuperscaffold110085000 Alkaloid 7DLH low borderline
HhamSuperscaffold110094430 Alkaloid 7DLH low borderline
HhamSuperscaffold130128510 Alkaloid 7DLH low borderline
HhamSuperscaffold130143080 Alkaloid 7DLH low borderline
HhamSuperscaffold130151880 Alkaloid 7DLH medium borderline
HhamSuperscaffold130153860 Alkaloid 7DLH medium borderline
HhamSuperscaffold150186230 Alkaloid 7DLH medium borderline
HhamSuperscaffold160215150 Alkaloid 7DLH medium borderline
HhamSuperscaffold180245420 Alkaloid 7DLH medium borderline
HhamSuperscaffold180252660 Alkaloid 7DLH medium borderline
HhamSuperscaffold180261850 Alkaloid 7DLH low borderline
HhamSuperscaffold20290440 Alkaloid 7DLH medium borderline
HhamSuperscaffold20296480 Alkaloid 7DLH medium borderline
HhamSuperscaffold210353340 Alkaloid 7DLH medium borderline
HhamSuperscaffold210353350 Alkaloid 7DLH medium borderline
HhamSuperscaffold210353470 Alkaloid 7DLH medium borderline
HhamSuperscaffold210353500 Alkaloid 7DLH medium borderline
HhamSuperscaffold230402710 Alkaloid 7DLH medium borderline
HhamSuperscaffold240428690 Alkaloid 7DLH medium borderline
HhamSuperscaffold240428720 Alkaloid 7DLH medium borderline
HhamSuperscaffold270479030 Alkaloid 7DLH medium borderline
HhamSuperscaffold270479090 Alkaloid 7DLH medium borderline
HhamSuperscaffold270485040 Alkaloid 7DLH medium borderline
HhamSuperscaffold280500590 Alkaloid 7DLH medium borderline
HhamSuperscaffold280508570 Alkaloid 7DLH medium borderline
HhamSuperscaffold280508580 Alkaloid 7DLH medium borderline