PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

5069
Candidate Protein Records
4039
Pathway-Level Records
10326
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HhamSuperscaffold320622860 Terpenoid BAHD medium pass
HhamSuperscaffold320624480 Terpenoid BAHD medium pass
HhamSuperscaffold320624490 Terpenoid BAHD medium pass
HhamSuperscaffold320627090 Terpenoid BAHD medium pass
HhamSuperscaffold320627870 Terpenoid BAHD medium pass
HhamSuperscaffold320628210 Terpenoid BAHD medium pass
HhamSuperscaffold320628220 Terpenoid BAHD low borderline
HhamSuperscaffold320628230 Terpenoid BAHD low borderline
HhamSuperscaffold320628240 Terpenoid BAHD low borderline
HhamSuperscaffold320630530 Terpenoid BAHD low borderline
HhamSuperscaffold320631800 Terpenoid BAHD low borderline
HhamSuperscaffold320633290 Terpenoid BAHD medium pass
HhamSuperscaffold320634010 Terpenoid BAHD medium pass
HhamSuperscaffold320634630 Terpenoid BAHD medium pass
HhamSuperscaffold320636230 Terpenoid BAHD medium borderline
HhamSuperscaffold320636260 Terpenoid BAHD medium borderline
HhamSuperscaffold330640670 Terpenoid BAHD medium pass
HhamSuperscaffold330640680 Terpenoid BAHD medium pass
HhamSuperscaffold330642880 Terpenoid BAHD medium pass
HhamSuperscaffold330646910 Terpenoid BAHD medium pass
HhamSuperscaffold330648110 Terpenoid BAHD medium borderline
HhamSuperscaffold330648150 Terpenoid BAHD medium borderline
HhamSuperscaffold330648810 Terpenoid BAHD medium pass
HhamSuperscaffold340656810 Terpenoid BAHD medium pass
HhamSuperscaffold340659570 Terpenoid BAHD medium pass
HhamSuperscaffold340661290 Terpenoid BAHD medium pass
HhamSuperscaffold340662830 Terpenoid BAHD medium pass
HhamSuperscaffold340666030 Terpenoid BAHD medium pass
HhamSuperscaffold340666040 Terpenoid BAHD medium pass
HhamSuperscaffold340666660 Terpenoid BAHD medium pass
HhamSuperscaffold340668060 Terpenoid BAHD medium pass
HhamSuperscaffold350670930 Terpenoid BAHD low borderline
HhamSuperscaffold350670940 Terpenoid BAHD low borderline
HhamSuperscaffold350671500 Terpenoid BAHD low borderline
HhamSuperscaffold350671520 Terpenoid BAHD low borderline
HhamSuperscaffold350671530 Terpenoid BAHD low borderline
HhamSuperscaffold350672100 Terpenoid BAHD low borderline
HhamSuperscaffold350672130 Terpenoid BAHD low borderline
HhamSuperscaffold350674190 Terpenoid BAHD low borderline
HhamSuperscaffold350677610 Terpenoid BAHD medium pass
HhamSuperscaffold350679990 Terpenoid BAHD medium pass
HhamSuperscaffold350680020 Terpenoid BAHD medium pass
HhamSuperscaffold350680740 Terpenoid BAHD medium pass
HhamSuperscaffold350681100 Terpenoid BAHD medium pass
HhamSuperscaffold360683620 Terpenoid BAHD medium pass
HhamSuperscaffold360683760 Terpenoid BAHD low borderline
HhamSuperscaffold360685900 Terpenoid BAHD medium pass
HhamSuperscaffold360692440 Terpenoid BAHD medium pass
HhamSuperscaffold360692810 Terpenoid BAHD medium pass
HhamSuperscaffold370699020 Terpenoid BAHD medium pass