PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
LchiScaffold10390006860 Terpenoid AACT medium borderline
LchiScaffold11910027240 Terpenoid AACT low borderline
LchiScaffold12130032390 Terpenoid AACT medium pass
LchiScaffold13800054340 Terpenoid AACT medium pass
LchiScaffold14900067490 Terpenoid AACT medium borderline
LchiScaffold15560074630 Terpenoid AACT medium borderline
LchiScaffold18050098220 Terpenoid AACT low borderline
LchiScaffold18830104700 Terpenoid AACT medium borderline
LchiScaffold24190140060 Terpenoid AACT low borderline
LchiScaffold24190140080 Terpenoid AACT medium pass
LchiScaffold2720155570 Terpenoid AACT low borderline
LchiScaffold2900170840 Terpenoid AACT medium borderline
LchiScaffold29680176100 Terpenoid AACT medium borderline
LchiScaffold34190197520 Terpenoid AACT low borderline
LchiScaffold34190197550 Terpenoid AACT low borderline
LchiScaffold34940204830 Terpenoid AACT low borderline
LchiScaffold6810284320 Terpenoid AACT medium borderline
LchiScaffold7810310470 Terpenoid AACT low borderline
LchiScaffold8900332620 Terpenoid AACT low borderline
LchiScaffold1000001430 Terpenoid BAHD medium pass
LchiScaffold1000001440 Terpenoid BAHD medium pass
LchiScaffold1000001450 Terpenoid BAHD medium pass
LchiScaffold1000001570 Terpenoid BAHD medium pass
LchiScaffold1000002670 Terpenoid BAHD medium pass
LchiScaffold10170003880 Terpenoid BAHD medium pass
LchiScaffold1020004020 Terpenoid BAHD medium pass
LchiScaffold1050009210 Terpenoid BAHD low borderline
LchiScaffold10880013670 Terpenoid BAHD medium pass
LchiScaffold10880013790 Terpenoid BAHD medium pass
LchiScaffold11300018470 Terpenoid BAHD low borderline
LchiScaffold11300018640 Terpenoid BAHD medium pass
LchiScaffold11300018670 Terpenoid BAHD medium pass
LchiScaffold11470021380 Terpenoid BAHD medium pass
LchiScaffold11470021390 Terpenoid BAHD medium pass
LchiScaffold11470021400 Terpenoid BAHD medium pass
LchiScaffold11630024570 Terpenoid BAHD medium pass
LchiScaffold11630024720 Terpenoid BAHD low borderline
LchiScaffold11630024740 Terpenoid BAHD medium pass
LchiScaffold11910027170 Terpenoid BAHD low borderline
LchiScaffold11910030330 Terpenoid BAHD low borderline
LchiScaffold12020031760 Terpenoid BAHD medium pass
LchiScaffold12150032650 Terpenoid BAHD medium pass
LchiScaffold12210033440 Terpenoid BAHD medium pass
LchiScaffold12240034140 Terpenoid BAHD medium pass
LchiScaffold12420036170 Terpenoid BAHD medium pass
LchiScaffold12630036740 Terpenoid BAHD medium pass
LchiScaffold12800037950 Terpenoid BAHD medium pass
LchiScaffold12920040050 Terpenoid BAHD low borderline
LchiScaffold1350048750 Terpenoid BAHD medium pass
LchiScaffold1350048760 Terpenoid BAHD medium pass