Liriodendron chinense (liriodendron_chinense)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.23% Alkaloid pathway 23.42% Phenylpropanoid pathway 20.14% Flavonoid pathway 13.93% Rosmarinic acid pathway 9.93% Steroid pathway 5.35%

Family Distribution

2075 Candidate Genes

C3'H/CYP98A 6.95% C4H 6.85% BAHD 5.0% CYP76 4.5% IFS 4.12% UGT 4.06% T3O 3.89% 7DLGT 3.85%

Other Families 60.78%

More Families (97)

UFGT 193 3.71% POD 155 2.98% 4CL 150 2.89% DWF4/CYP90B1 148 2.85% F3'H/CYP75B 127 2.44% BR6OX2/CYP85A2 118 2.27% CAD 115 2.21% F3H 103 1.98% TPS 85 1.64% GES 79 1.52% CYP71 72 1.39% COMT 71 1.37% CODM/T6ODM 68 1.31% CAS 68 1.31% NMT 67 1.29% TRI/TRII 63 1.21% 16OMT 61 1.17% T16H 60 1.15% STR 59 1.14% SGD 57 1.1% SMT1/SMT2/SMT3 56 1.08% HCT 54 1.04% CSE 54 1.04% ANR 52 1.0% CYP90D1 50 0.96% PYKS 45 0.87% GS 45 0.87% IFR 44 0.85% G8O/G8H 40 0.77% H6H 38 0.73% LAC 38 0.73% COR 32 0.62% IO 29 0.56% RAS 29 0.56% CCR 28 0.54% SLS 27 0.52% PAL 27 0.52% TAT 27 0.52% F3'5'H/CYP75A 26 0.5% 7DLH 25 0.48% CHS 25 0.48% CYP51G1 25 0.48% FNS 24 0.46% PMT 23 0.44% NCS 22 0.42% DFR 20 0.38% BR6OX1/CYP85A1 19 0.37% AACT 19 0.37% MPO 18 0.35% CPD/CYP90A1 18 0.35% CYP719 17 0.33% BBE 17 0.33% 8HGO 15 0.29% F5H/CYP84A 15 0.29% TYDC_DDC 13 0.25% ANS/LDOX 13 0.25% LAMT 11 0.21% CNMT 10 0.19% CHI 10 0.19% CCoAOMT 10 0.19% GGPPS 10 0.19% DXS 9 0.17% CPR 8 0.15% ROT3/CYP90C1 8 0.15% SQS/FDFT1 7 0.13% HPPR 6 0.12% FPPS 6 0.12% MVK 6 0.12% ODC 5 0.1% XMT_MXMT_DXMT 5 0.1% SMO1/SMO2 5 0.1% ISY 4 0.08% DWF7 4 0.08% DET2 4 0.08% MVD 4 0.08% ADC 3 0.06% TDC 3 0.06% FLS 3 0.06% SQE 3 0.06% HMGS 3 0.06% CYP80B1 2 0.04% CPI1 2 0.04% IDI 2 0.04% PMK 2 0.04% DXR 2 0.04% HMGR 2 0.04% CYP80F1 1 0.02% 6OMT_4OMT_SOMT 1 0.02% HYD1 1 0.02% DWF1 1 0.02% FK 1 0.02% DWF5 1 0.02% HDR/IspH 1 0.02% CMK/IspE 1 0.02% HDS/IspG 1 0.02% MDS/IspF 1 0.02% MCT/IspD 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	565	20	UGT (192)	View species results
Alkaloid pathway	486	23	7DLGT (113)	View species results
Phenylpropanoid pathway	418	11	POD (141)	View species results
Flavonoid pathway	289	11	UFGT (181)	View species results
Rosmarinic acid pathway	206	7	C4H (118)	View species results
Steroid pathway	111	13	CAS (57)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	2194	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	343	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
LchiScaffold1350049950	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
LchiScaffold13580051270	Terpenoid	BAHD	medium	pass	BAHD__00073__sp_Q9FF86_DCR_ARATH
LchiScaffold13800053910	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LchiScaffold14000057600	Terpenoid	BAHD	low	borderline	BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
LchiScaffold1400056360	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
LchiScaffold1420059490	Terpenoid	BAHD	low	borderline	BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
LchiScaffold1420059530	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
LchiScaffold1420059550	Terpenoid	BAHD	low	borderline	BAHD__00047__sp_Q5KS41_WSD11_ARATH
LchiScaffold1420059670	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
LchiScaffold1420059680	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
LchiScaffold14530062340	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
LchiScaffold14530062350	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
LchiScaffold14530062400	Terpenoid	BAHD	low	borderline	BAHD__00012__sp_A1XWY7_CFAT_PETHY
LchiScaffold14530062440	Terpenoid	BAHD	low	borderline	BAHD__00012__sp_A1XWY7_CFAT_PETHY
LchiScaffold14540062600	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
LchiScaffold14660064420	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
LchiScaffold1470064640	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
LchiScaffold14770066320	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
LchiScaffold14860067150	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
LchiScaffold14900067750	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
LchiScaffold14900067760	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
LchiScaffold14900067770	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
LchiScaffold14900067870	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
LchiScaffold15030070250	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold15030070260	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold15080071170	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold15080071180	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold15130071960	Terpenoid	BAHD	medium	pass	BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
LchiScaffold15190072510	Terpenoid	BAHD	medium	pass	BAHD__00026__sp_O64811_SCP9_ARATH
LchiScaffold15800076860	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
LchiScaffold1590077720	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
LchiScaffold1590077740	Terpenoid	BAHD	low	borderline	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
LchiScaffold1590078830	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
LchiScaffold1620081590	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
LchiScaffold16980085530	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold17070087150	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
LchiScaffold17630094610	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
LchiScaffold17660094790	Terpenoid	BAHD	medium	pass	BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
LchiScaffold17900096650	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LchiScaffold18200100260	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
LchiScaffold18200100610	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
LchiScaffold1820100010	Terpenoid	BAHD	low	borderline	BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
LchiScaffold1820100020	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
LchiScaffold1820100030	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
LchiScaffold18280100920	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
LchiScaffold18660103350	Terpenoid	BAHD	medium	pass	BAHD__00032__sp_P0DO84_AT_STRNX
LchiScaffold1890105440	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
LchiScaffold19000106630	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
LchiScaffold19880114410	Terpenoid	BAHD	medium	pass	BAHD__00048__sp_Q5M757_ZDH15_ARATH
LchiScaffold19880114430	Terpenoid	BAHD	low	borderline	BAHD__00023__sp_O22975_LPAAT_ARATH