PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
LchiScaffold16570083370 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold16960085230 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1720089110 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1720089350 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1720089390 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089400 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089430 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089440 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089450 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089460 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1720089470 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold17490092580 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold17660094660 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold17660094810 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold17870096350 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold18390101620 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1850102230 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1850102250 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1850102280 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1870103530 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold19040107550 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1920107910 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold19280109560 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold19290109650 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1930110020 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1930110440 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold19530112010 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold19790113620 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold20150116550 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold20340117490 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold20430117590 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold21180122830 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold21180122840 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold22230128310 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold22730132550 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold23140133160 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133620 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133640 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133760 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133780 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133790 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133810 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133820 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133840 Phenylpropanoid C3'H/CYP98A medium pass
LchiScaffold23140133850 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133890 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133910 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133920 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23140133930 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2340134990 Phenylpropanoid C3'H/CYP98A low borderline