PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
LchiScaffold2340135000 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold2340135100 Phenylpropanoid C3'H/CYP98A medium pass
LchiScaffold23410136870 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23410136880 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23410136890 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold23650137630 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold24090139010 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold24110139060 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24110139070 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24110139080 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24110139120 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24110139300 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24110139310 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24320140720 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24320140730 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold24670142910 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2480144910 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold2480144940 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold2480145000 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold2480145030 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold2480145340 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold25080147270 Phenylpropanoid C3'H/CYP98A high pass
LchiScaffold25280147630 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2690154360 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2720156580 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2720156610 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold2790158370 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold27950159050 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold27950159060 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold27950159070 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold27950159080 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold27950159090 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160200 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160210 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160230 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160250 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160260 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160270 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160300 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160330 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160350 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160370 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160390 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160400 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160440 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280160450 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold280161160 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold280161270 Phenylpropanoid C3'H/CYP98A medium pass
LchiScaffold28120163010 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold28380166230 Phenylpropanoid C3'H/CYP98A medium borderline