PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0043710.1 Rosmarinic Acid C4H low borderline
Mtru04G0043740.1 Rosmarinic Acid C4H low borderline
Mtru04G0043980.1 Rosmarinic Acid C4H low borderline
Mtru04G0043990.1 Rosmarinic Acid C4H medium pass
Mtru04G0044000.1 Rosmarinic Acid C4H low borderline
Mtru04G0044010.1 Rosmarinic Acid C4H medium pass
Mtru04G0044020.1 Rosmarinic Acid C4H medium pass
Mtru04G0044940.1 Rosmarinic Acid C4H medium pass
Mtru04G0044950.1 Rosmarinic Acid C4H low borderline
Mtru04G0044960.1 Rosmarinic Acid C4H low borderline
Mtru04G0045000.1 Rosmarinic Acid C4H medium pass
Mtru04G0049550.1 Rosmarinic Acid C4H medium pass
Mtru04G0049560.1 Rosmarinic Acid C4H low borderline
Mtru04G0050230.1 Rosmarinic Acid C4H medium pass
Mtru04G0053350.1 Rosmarinic Acid C4H medium pass
Mtru04G0053360.1 Rosmarinic Acid C4H low borderline
Mtru04G0053370.1 Rosmarinic Acid C4H medium pass
Mtru04G0054660.1 Rosmarinic Acid C4H low borderline
Mtru04G0054670.1 Rosmarinic Acid C4H medium pass
Mtru04G0054680.1 Rosmarinic Acid C4H medium pass
Mtru04G0054700.1 Rosmarinic Acid C4H medium pass
Mtru04G0054720.1 Rosmarinic Acid C4H low borderline
Mtru04G0054730.1 Rosmarinic Acid C4H medium pass
Mtru04G0057620.1 Rosmarinic Acid C4H medium pass
Mtru04G0059360.1 Rosmarinic Acid C4H low borderline
Mtru04G0063300.1 Rosmarinic Acid C4H low borderline
Mtru04G0070760.1 Rosmarinic Acid C4H low borderline
Mtru04G0072310.1 Rosmarinic Acid C4H low borderline
Mtru04G0072320.1 Rosmarinic Acid C4H low borderline
Mtru05G0002140.1 Rosmarinic Acid C4H medium pass
Mtru05G0002150.1 Rosmarinic Acid C4H medium pass
Mtru05G0002210.1 Rosmarinic Acid C4H medium pass
Mtru05G0003450.1 Rosmarinic Acid C4H low borderline
Mtru05G0003450.3 Rosmarinic Acid C4H low borderline
Mtru05G0007310.1 Rosmarinic Acid C4H low borderline
Mtru05G0007320.1 Rosmarinic Acid C4H low borderline
Mtru05G0007330.1 Rosmarinic Acid C4H low borderline
Mtru05G0008620.1 Rosmarinic Acid C4H medium pass
Mtru05G0008630.1 Rosmarinic Acid C4H low borderline
Mtru05G0010030.1 Rosmarinic Acid C4H low borderline
Mtru05G0010050.1 Rosmarinic Acid C4H medium pass
Mtru05G0010350.1 Rosmarinic Acid C4H low borderline
Mtru05G0010360.1 Rosmarinic Acid C4H low borderline
Mtru05G0010370.1 Rosmarinic Acid C4H low borderline
Mtru05G0010490.1 Rosmarinic Acid C4H low borderline
Mtru05G0011010.1 Rosmarinic Acid C4H low borderline
Mtru05G0011010.2 Rosmarinic Acid C4H low borderline
Mtru05G0011900.1 Rosmarinic Acid C4H low borderline
Mtru05G0012010.1 Rosmarinic Acid C4H medium pass
Mtru05G0013640.1 Rosmarinic Acid C4H medium pass