PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0053370.1 Alkaloid T3O medium borderline
Mtru04G0054680.1 Alkaloid T3O medium borderline
Mtru04G0054720.1 Alkaloid T3O medium borderline
Mtru04G0054730.1 Alkaloid T3O medium borderline
Mtru04G0057620.1 Alkaloid T3O medium borderline
Mtru04G0072310.1 Alkaloid T3O medium borderline
Mtru04G0072320.1 Alkaloid T3O medium borderline
Mtru05G0002140.1 Alkaloid T3O medium borderline
Mtru05G0002150.1 Alkaloid T3O medium borderline
Mtru05G0002210.1 Alkaloid T3O medium borderline
Mtru05G0004790.1 Alkaloid T3O medium pass
Mtru05G0004790.2 Alkaloid T3O medium pass
Mtru05G0007310.1 Alkaloid T3O low borderline
Mtru05G0007320.1 Alkaloid T3O medium pass
Mtru05G0007330.1 Alkaloid T3O medium pass
Mtru05G0008630.1 Alkaloid T3O medium borderline
Mtru05G0010050.1 Alkaloid T3O medium borderline
Mtru05G0010350.1 Alkaloid T3O medium borderline
Mtru05G0010360.1 Alkaloid T3O medium borderline
Mtru05G0010370.1 Alkaloid T3O medium borderline
Mtru05G0010510.1 Alkaloid T3O low borderline
Mtru05G0011010.1 Alkaloid T3O medium pass
Mtru05G0011010.2 Alkaloid T3O medium pass
Mtru05G0011900.1 Alkaloid T3O medium pass
Mtru05G0012010.1 Alkaloid T3O medium borderline
Mtru05G0013640.1 Alkaloid T3O medium borderline
Mtru05G0015110.1 Alkaloid T3O medium pass
Mtru05G0015110.2 Alkaloid T3O medium pass
Mtru05G0015110.3 Alkaloid T3O low borderline
Mtru05G0027080.1 Alkaloid T3O medium borderline
Mtru05G0027400.1 Alkaloid T3O medium borderline
Mtru05G0038320.1 Alkaloid T3O medium borderline
Mtru05G0038330.1 Alkaloid T3O medium borderline
Mtru05G0038370.1 Alkaloid T3O medium borderline
Mtru05G0038410.1 Alkaloid T3O medium borderline
Mtru05G0038420.1 Alkaloid T3O medium borderline
Mtru05G0038430.1 Alkaloid T3O medium borderline
Mtru05G0038440.1 Alkaloid T3O medium borderline
Mtru05G0038470.1 Alkaloid T3O medium borderline
Mtru05G0039710.1 Alkaloid T3O medium borderline
Mtru05G0039750.1 Alkaloid T3O medium borderline
Mtru05G0039780.1 Alkaloid T3O medium borderline
Mtru05G0039870.1 Alkaloid T3O medium borderline
Mtru05G0039900.1 Alkaloid T3O medium borderline
Mtru05G0039960.1 Alkaloid T3O medium borderline
Mtru05G0052900.1 Alkaloid T3O medium pass
Mtru05G0054210.1 Alkaloid T3O medium borderline
Mtru05G0054640.1 Alkaloid T3O medium borderline
Mtru05G0054650.1 Alkaloid T3O medium borderline
Mtru05G0054660.1 Alkaloid T3O medium borderline