PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru01G0057410.1 Flavonoid F3H medium borderline
Mtru02G0012810.1 Flavonoid F3H medium borderline
Mtru02G0012810.2 Flavonoid F3H medium borderline
Mtru02G0017660.1 Flavonoid F3H medium borderline
Mtru02G0020290.1 Flavonoid F3H medium borderline
Mtru02G0020290.2 Flavonoid F3H medium borderline
Mtru02G0035980.1 Flavonoid F3H medium borderline
Mtru02G0035990.1 Flavonoid F3H medium borderline
Mtru02G0036070.1 Flavonoid F3H medium borderline
Mtru02G0036080.1 Flavonoid F3H medium borderline
Mtru02G0036110.1 Flavonoid F3H medium borderline
Mtru02G0036120.1 Flavonoid F3H medium borderline
Mtru02G0036120.2 Flavonoid F3H medium borderline
Mtru02G0036150.1 Flavonoid F3H medium borderline
Mtru02G0036150.2 Flavonoid F3H medium borderline
Mtru02G0036170.1 Flavonoid F3H medium borderline
Mtru02G0036190.1 Flavonoid F3H medium borderline
Mtru02G0036200.1 Flavonoid F3H medium borderline
Mtru02G0036260.1 Flavonoid F3H medium borderline
Mtru02G0038430.1 Flavonoid F3H medium borderline
Mtru02G0038450.1 Flavonoid F3H medium borderline
Mtru02G0043500.1 Flavonoid F3H medium borderline
Mtru02G0043520.1 Flavonoid F3H low borderline
Mtru02G0056440.1 Flavonoid F3H medium borderline
Mtru03G0005560.1 Flavonoid F3H low borderline
Mtru03G0016000.1 Flavonoid F3H low borderline
Mtru03G0016410.1 Flavonoid F3H medium borderline
Mtru03G0016430.1 Flavonoid F3H medium borderline
Mtru03G0024190.1 Flavonoid F3H medium borderline
Mtru03G0027550.1 Flavonoid F3H low borderline
Mtru03G0027550.2 Flavonoid F3H low borderline
Mtru03G0030800.1 Flavonoid F3H medium borderline
Mtru03G0034990.1 Flavonoid F3H medium borderline
Mtru03G0036310.1 Flavonoid F3H medium borderline
Mtru03G0036320.1 Flavonoid F3H medium borderline
Mtru03G0043060.1 Flavonoid F3H medium borderline
Mtru03G0043060.2 Flavonoid F3H medium borderline
Mtru03G0047000.1 Flavonoid F3H medium borderline
Mtru03G0047200.1 Flavonoid F3H medium borderline
Mtru03G0047240.1 Flavonoid F3H low borderline
Mtru03G0048500.1 Flavonoid F3H medium borderline
Mtru03G0048510.1 Flavonoid F3H medium borderline
Mtru03G0049680.1 Flavonoid F3H medium borderline
Mtru03G0052080.1 Flavonoid F3H medium borderline
Mtru03G0059910.1 Flavonoid F3H low borderline
Mtru03G0066730.1 Flavonoid F3H medium borderline
Mtru03G0066750.1 Flavonoid F3H medium borderline
Mtru03G0066750.2 Flavonoid F3H medium borderline
Mtru04G0004010.1 Flavonoid F3H low borderline
Mtru04G0004020.1 Flavonoid F3H low borderline