PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0004020.2 Flavonoid F3H low borderline
Mtru04G0006380.1 Flavonoid F3H medium borderline
Mtru04G0009190.1 Flavonoid F3H low borderline
Mtru04G0010930.1 Flavonoid F3H medium borderline
Mtru04G0034790.1 Flavonoid F3H medium borderline
Mtru04G0042850.1 Flavonoid F3H medium borderline
Mtru04G0042860.1 Flavonoid F3H medium borderline
Mtru04G0042870.1 Flavonoid F3H medium borderline
Mtru04G0042880.1 Flavonoid F3H medium borderline
Mtru04G0042890.1 Flavonoid F3H medium borderline
Mtru04G0042900.1 Flavonoid F3H medium borderline
Mtru04G0047220.1 Flavonoid F3H medium borderline
Mtru04G0049080.1 Flavonoid F3H low borderline
Mtru04G0049890.1 Flavonoid F3H low borderline
Mtru04G0052270.1 Flavonoid F3H low borderline
Mtru04G0052270.2 Flavonoid F3H low borderline
Mtru04G0052280.1 Flavonoid F3H low borderline
Mtru04G0052280.2 Flavonoid F3H low borderline
Mtru04G0052290.1 Flavonoid F3H low borderline
Mtru04G0060950.1 Flavonoid F3H medium borderline
Mtru04G0060960.1 Flavonoid F3H medium borderline
Mtru04G0062280.1 Flavonoid F3H medium borderline
Mtru04G0063090.1 Flavonoid F3H medium borderline
Mtru04G0065050.1 Flavonoid F3H medium borderline
Mtru04G0071550.1 Flavonoid F3H medium borderline
Mtru05G0000620.1 Flavonoid F3H medium borderline
Mtru05G0005100.1 Flavonoid F3H medium borderline
Mtru05G0012400.1 Flavonoid F3H medium borderline
Mtru05G0014590.1 Flavonoid F3H low borderline
Mtru05G0014710.1 Flavonoid F3H low borderline
Mtru05G0014720.1 Flavonoid F3H low borderline
Mtru05G0014740.1 Flavonoid F3H low borderline
Mtru05G0018980.1 Flavonoid F3H low borderline
Mtru05G0019710.1 Flavonoid F3H medium borderline
Mtru05G0019720.1 Flavonoid F3H low borderline
Mtru05G0028450.1 Flavonoid F3H medium borderline
Mtru05G0028460.1 Flavonoid F3H medium borderline
Mtru05G0028480.1 Flavonoid F3H medium borderline
Mtru05G0028550.1 Flavonoid F3H medium borderline
Mtru05G0028600.1 Flavonoid F3H medium borderline
Mtru05G0030260.1 Flavonoid F3H medium borderline
Mtru05G0030260.2 Flavonoid F3H medium borderline
Mtru05G0030260.3 Flavonoid F3H medium borderline
Mtru05G0030270.1 Flavonoid F3H medium borderline
Mtru05G0030270.2 Flavonoid F3H medium borderline
Mtru05G0030310.1 Flavonoid F3H medium borderline
Mtru05G0030320.1 Flavonoid F3H medium borderline
Mtru05G0030360.1 Flavonoid F3H medium borderline
Mtru05G0031630.1 Flavonoid F3H medium borderline
Mtru05G0031640.1 Flavonoid F3H medium borderline