PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0015170.1 Flavonoid F3H low borderline
Mtru08G0017050.1 Flavonoid F3H medium borderline
Mtru08G0020450.1 Flavonoid F3H medium borderline
Mtru08G0020450.2 Flavonoid F3H medium borderline
Mtru08G0020470.1 Flavonoid F3H medium borderline
Mtru08G0029730.1 Flavonoid F3H medium borderline
Mtru08G0030880.1 Flavonoid F3H medium borderline
Mtru08G0031190.1 Flavonoid F3H medium borderline
Mtru08G0031990.1 Flavonoid F3H medium borderline
Mtru08G0031990.2 Flavonoid F3H medium borderline
Mtru08G0031990.3 Flavonoid F3H medium borderline
Mtru08G0031990.4 Flavonoid F3H medium borderline
Mtru08G0037800.1 Flavonoid F3H medium borderline
Mtru08G0037810.1 Flavonoid F3H medium borderline
Mtru08G0037810.2 Flavonoid F3H medium borderline
Mtru08G0038960.1 Flavonoid F3H medium borderline
Mtru08G0038970.1 Flavonoid F3H medium borderline
Mtru08G0049110.1 Flavonoid F3H low borderline
Mtru08G0049140.1 Flavonoid F3H medium pass
Mtru08G0054580.1 Flavonoid F3H low borderline
Mtru08G0054580.2 Flavonoid F3H low borderline
Mtruscaffold00090002160.1 Flavonoid F3H medium borderline
Mtruscaffold00090002160.2 Flavonoid F3H medium borderline
Mtruscaffold00090002160.3 Flavonoid F3H medium borderline
Mtruscaffold00090002160.4 Flavonoid F3H medium borderline
Mtruscaffold00090002160.5 Flavonoid F3H medium borderline
Mtruscaffold00090002160.6 Flavonoid F3H medium borderline
Mtruscaffold00090002160.7 Flavonoid F3H medium borderline
Mtruscaffold00090002160.8 Flavonoid F3H medium borderline
Mtruscaffold00090002160.9 Flavonoid F3H medium borderline
Mtruscaffold00090002330.1 Flavonoid F3H medium borderline
Mtruscaffold00090002350.1 Flavonoid F3H medium borderline
Mtruscaffold00320005320.1 Flavonoid F3H medium borderline
Mtruscaffold00560007420.1 Flavonoid F3H medium borderline
Mtruscaffold03280015750.1 Flavonoid F3H medium borderline
Mtru01G0037080.1 Flavonoid FLS medium borderline
Mtru01G0037080.3 Flavonoid FLS medium borderline
Mtru03G0015970.1 Flavonoid FLS medium borderline
Mtru03G0015990.1 Flavonoid FLS medium borderline
Mtru01G0005220.1 Flavonoid FNS medium borderline
Mtru01G0005220.2 Flavonoid FNS medium borderline
Mtru01G0008900.1 Flavonoid FNS medium borderline
Mtru01G0017590.1 Flavonoid FNS low borderline
Mtru01G0037080.2 Flavonoid FNS medium borderline
Mtru01G0037090.1 Flavonoid FNS medium borderline
Mtru01G0057520.1 Flavonoid FNS medium borderline
Mtru01G0061040.1 Flavonoid FNS medium borderline
Mtru02G0020620.1 Flavonoid FNS medium borderline
Mtru02G0024050.1 Flavonoid FNS low borderline
Mtru02G0024050.2 Flavonoid FNS low borderline