PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru03G0001270.1 Flavonoid FNS medium borderline
Mtru03G0023630.1 Flavonoid FNS medium borderline
Mtru03G0023730.1 Flavonoid FNS medium borderline
Mtru03G0023800.1 Flavonoid FNS medium borderline
Mtru03G0023870.1 Flavonoid FNS medium borderline
Mtru03G0057320.1 Flavonoid FNS low borderline
Mtru03G0057540.1 Flavonoid FNS medium borderline
Mtru03G0057540.2 Flavonoid FNS medium borderline
Mtru04G0053360.1 Flavonoid FNS medium borderline
Mtru04G0072320.1 Flavonoid FNS medium borderline
Mtru05G0007690.1 Flavonoid FNS medium borderline
Mtru05G0054640.1 Flavonoid FNS medium borderline
Mtru06G0007280.1 Flavonoid FNS medium borderline
Mtru06G0017750.1 Flavonoid FNS medium borderline
Mtru06G0034660.1 Flavonoid FNS medium borderline
Mtru07G0032220.1 Flavonoid FNS medium borderline
Mtru07G0035140.1 Flavonoid FNS medium borderline
Mtru07G0035140.2 Flavonoid FNS medium borderline
Mtru08G0000750.1 Flavonoid FNS medium borderline
Mtru08G0000770.1 Flavonoid FNS medium borderline
Mtru08G0005800.1 Flavonoid FNS medium borderline
Mtru08G0008530.1 Flavonoid FNS low borderline
Mtru08G0008530.2 Flavonoid FNS low borderline
Mtru08G0039320.1 Flavonoid FNS medium borderline
Mtru08G0048470.1 Flavonoid FNS medium borderline
Mtruscaffold00450006400.1 Flavonoid FNS medium borderline
Mtruscaffold00450006400.2 Flavonoid FNS medium borderline
Mtruscaffold12620023090.1 Flavonoid FNS low borderline
Mtru01G0035080.1 Flavonoid IFR low borderline
Mtru01G0036240.1 Flavonoid IFR low borderline
Mtru01G0052040.1 Flavonoid IFR high pass
Mtru02G0009750.1 Flavonoid IFR low borderline
Mtru03G0001700.1 Flavonoid IFR low borderline
Mtru03G0001720.1 Flavonoid IFR high pass
Mtru03G0001800.1 Flavonoid IFR high pass
Mtru03G0001800.2 Flavonoid IFR medium pass
Mtru03G0001800.3 Flavonoid IFR high pass
Mtru03G0001820.1 Flavonoid IFR high pass
Mtru03G0058360.1 Flavonoid IFR low borderline
Mtru03G0063410.1 Flavonoid IFR high pass
Mtru03G0063420.1 Flavonoid IFR high pass
Mtru03G0066270.1 Flavonoid IFR high pass
Mtru03G0067460.1 Flavonoid IFR medium pass
Mtru03G0067460.2 Flavonoid IFR medium pass
Mtru04G0000020.1 Flavonoid IFR low borderline
Mtru04G0000020.2 Flavonoid IFR low borderline
Mtru04G0000020.3 Flavonoid IFR low borderline
Mtru04G0000020.4 Flavonoid IFR low borderline
Mtru04G0000020.5 Flavonoid IFR low borderline
Mtru04G0009560.1 Flavonoid IFR low borderline