PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru07G0004090.1 Phenylpropanoid COMT medium pass
Mtru07G0004120.1 Phenylpropanoid COMT medium pass
Mtru07G0004120.2 Phenylpropanoid COMT medium pass
Mtru07G0004120.3 Phenylpropanoid COMT medium pass
Mtru07G0004140.1 Phenylpropanoid COMT medium pass
Mtru07G0004170.1 Phenylpropanoid COMT medium pass
Mtru07G0004200.1 Phenylpropanoid COMT medium pass
Mtru07G0005080.1 Phenylpropanoid COMT low borderline
Mtru07G0005100.1 Phenylpropanoid COMT medium pass
Mtru07G0009780.1 Phenylpropanoid COMT medium pass
Mtru07G0009790.1 Phenylpropanoid COMT medium pass
Mtru07G0062020.1 Phenylpropanoid COMT medium pass
Mtru07G0062030.1 Phenylpropanoid COMT low borderline
Mtru07G0062040.1 Phenylpropanoid COMT medium pass
Mtru08G0012000.1 Phenylpropanoid COMT medium pass
Mtru08G0034310.1 Phenylpropanoid COMT medium pass
Mtru08G0034320.1 Phenylpropanoid COMT medium pass
Mtru08G0034330.1 Phenylpropanoid COMT medium pass
Mtru08G0034340.1 Phenylpropanoid COMT medium pass
Mtru08G0034350.1 Phenylpropanoid COMT medium pass
Mtru08G0034370.1 Phenylpropanoid COMT medium pass
Mtru08G0034370.2 Phenylpropanoid COMT medium pass
Mtru08G0034400.1 Phenylpropanoid COMT medium pass
Mtru08G0034410.1 Phenylpropanoid COMT medium pass
Mtru08G0034420.1 Phenylpropanoid COMT medium pass
Mtru08G0034430.1 Phenylpropanoid COMT medium pass
Mtru08G0034440.1 Phenylpropanoid COMT medium pass
Mtruscaffold00170003340.1 Phenylpropanoid COMT medium pass
Mtruscaffold00790008530.1 Phenylpropanoid COMT medium pass
Mtruscaffold05910019280.1 Phenylpropanoid COMT medium pass
Mtruscaffold07940021010.1 Phenylpropanoid COMT medium pass
Mtru01G0007090.1 Phenylpropanoid CSE medium pass
Mtru01G0007090.2 Phenylpropanoid CSE medium pass
Mtru01G0009790.1 Phenylpropanoid CSE medium pass
Mtru01G0028990.1 Phenylpropanoid CSE medium pass
Mtru01G0048760.1 Phenylpropanoid CSE medium pass
Mtru01G0053040.1 Phenylpropanoid CSE medium pass
Mtru01G0061480.1 Phenylpropanoid CSE medium pass
Mtru01G0062910.1 Phenylpropanoid CSE medium pass
Mtru01G0062920.1 Phenylpropanoid CSE medium pass
Mtru01G0065980.1 Phenylpropanoid CSE medium pass
Mtru01G0065980.2 Phenylpropanoid CSE medium pass
Mtru01G0065980.3 Phenylpropanoid CSE medium pass
Mtru02G0007080.1 Phenylpropanoid CSE medium pass
Mtru02G0007330.1 Phenylpropanoid CSE medium pass
Mtru02G0007390.1 Phenylpropanoid CSE medium pass
Mtru02G0007470.1 Phenylpropanoid CSE low borderline
Mtru02G0034690.1 Phenylpropanoid CSE medium pass
Mtru02G0035660.1 Phenylpropanoid CSE low borderline
Mtru02G0039680.1 Phenylpropanoid CSE medium pass