PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru02G0044120.1 Phenylpropanoid CSE medium pass
Mtru03G0038350.1 Phenylpropanoid CSE medium pass
Mtru03G0042910.1 Phenylpropanoid CSE low borderline
Mtru03G0056050.1 Phenylpropanoid CSE medium pass
Mtru03G0063800.1 Phenylpropanoid CSE medium pass
Mtru03G0065790.1 Phenylpropanoid CSE medium pass
Mtru04G0010700.1 Phenylpropanoid CSE medium pass
Mtru04G0019830.1 Phenylpropanoid CSE medium pass
Mtru04G0029350.1 Phenylpropanoid CSE medium pass
Mtru04G0032620.1 Phenylpropanoid CSE medium pass
Mtru04G0033520.1 Phenylpropanoid CSE medium pass
Mtru04G0033930.1 Phenylpropanoid CSE medium pass
Mtru04G0034490.1 Phenylpropanoid CSE medium pass
Mtru04G0038320.1 Phenylpropanoid CSE medium pass
Mtru04G0038340.1 Phenylpropanoid CSE medium pass
Mtru04G0038560.1 Phenylpropanoid CSE medium pass
Mtru04G0038580.1 Phenylpropanoid CSE medium pass
Mtru04G0038950.1 Phenylpropanoid CSE medium pass
Mtru04G0038960.1 Phenylpropanoid CSE medium pass
Mtru04G0038980.1 Phenylpropanoid CSE medium pass
Mtru04G0045180.1 Phenylpropanoid CSE medium pass
Mtru04G0049940.1 Phenylpropanoid CSE medium pass
Mtru04G0054540.1 Phenylpropanoid CSE medium pass
Mtru04G0056580.1 Phenylpropanoid CSE medium pass
Mtru04G0066550.1 Phenylpropanoid CSE medium pass
Mtru04G0067680.1 Phenylpropanoid CSE medium pass
Mtru05G0012740.1 Phenylpropanoid CSE medium pass
Mtru07G0034500.1 Phenylpropanoid CSE medium pass
Mtru07G0034850.1 Phenylpropanoid CSE medium pass
Mtru07G0055080.1 Phenylpropanoid CSE medium pass
Mtru08G0044180.1 Phenylpropanoid CSE medium pass
Mtru08G0056380.1 Phenylpropanoid CSE medium pass
Mtru01G0015710.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru01G0051030.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru02G0003360.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru02G0007260.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0006730.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0006740.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0029710.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0029730.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0029760.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0038500.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0039030.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0000120.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0011560.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0033040.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0037250.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru04G0072320.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0007690.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0021020.1 Phenylpropanoid F5H/CYP84A medium borderline