PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru03G0059730.1 Terpenoid DXS medium pass
Mtru03G0059730.2 Terpenoid DXS medium pass
Mtru04G0062630.1 Terpenoid DXS medium pass
Mtru04G0062630.2 Terpenoid DXS medium pass
Mtru04G0062630.3 Terpenoid DXS medium pass
Mtru08G0034100.1 Terpenoid DXS medium pass
Mtru08G0034110.1 Terpenoid DXS medium pass
Mtru01G0053220.1 Terpenoid FPPS low borderline
Mtru02G0014300.1 Terpenoid FPPS medium pass
Mtru05G0038000.1 Terpenoid FPPS medium pass
Mtru05G0038010.1 Terpenoid FPPS medium pass
Mtru05G0038020.1 Terpenoid FPPS low borderline
Mtru05G0038030.1 Terpenoid FPPS medium pass
Mtru05G0038040.1 Terpenoid FPPS medium pass
Mtru08G0037520.1 Terpenoid FPPS low borderline
Mtru08G0037520.2 Terpenoid FPPS low borderline
Mtru08G0052250.1 Terpenoid FPPS low borderline
Mtru02G0038100.1 Terpenoid GGPPS medium borderline
Mtru04G0050240.2 Terpenoid GGPPS medium borderline
Mtru05G0010620.1 Terpenoid GGPPS medium borderline
Mtru05G0053460.1 Terpenoid GGPPS medium borderline
Mtru08G0040500.1 Terpenoid GGPPS medium borderline
Mtru04G0050240.1 Terpenoid GPPS medium borderline
Mtru01G0050630.1 Terpenoid HDR/IspH medium pass
Mtru04G0031350.1 Terpenoid HDR/IspH high pass
Mtru04G0031380.1 Terpenoid HDR/IspH high pass
Mtru02G0050820.1 Terpenoid HDS/IspG high pass
Mtru02G0050820.2 Terpenoid HDS/IspG high pass
Mtru04G0068430.1 Terpenoid HMGR low borderline
Mtru05G0006830.1 Terpenoid HMGR low borderline
Mtru05G0014530.1 Terpenoid HMGR medium pass
Mtru05G0014530.2 Terpenoid HMGR medium pass
Mtru05G0014530.3 Terpenoid HMGR medium pass
Mtru05G0015740.1 Terpenoid HMGR medium pass
Mtru05G0015760.1 Terpenoid HMGR medium pass
Mtru05G0015770.1 Terpenoid HMGR medium pass
Mtru05G0015780.1 Terpenoid HMGR medium pass
Mtru05G0015790.1 Terpenoid HMGR medium pass
Mtru05G0049300.1 Terpenoid HMGR medium pass
Mtru05G0052020.1 Terpenoid HMGR medium pass
Mtru08G0036950.1 Terpenoid HMGR medium pass
Mtru05G0004970.1 Terpenoid HMGS high pass
Mtru05G0004970.2 Terpenoid HMGS high pass
Mtru05G0053980.1 Terpenoid HMGS low borderline
Mtru06G0025600.1 Terpenoid HMGS high pass
Mtru07G0035540.1 Terpenoid IDI medium pass
Mtru04G0047600.1 Terpenoid MCT/IspD low borderline
Mtru04G0049220.1 Terpenoid MCT/IspD low borderline
Mtru04G0049220.2 Terpenoid MCT/IspD low borderline
Mtru04G0068930.1 Terpenoid MCT/IspD low borderline