PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0072900.1 Terpenoid MCT/IspD high pass
Mtru04G0072900.2 Terpenoid MCT/IspD medium pass
Mtru05G0004140.1 Terpenoid MDS/IspF high pass
Mtru07G0019910.1 Terpenoid MDS/IspF low borderline
Mtru01G0063890.1 Terpenoid MVD low borderline
Mtru01G0063890.2 Terpenoid MVD low borderline
Mtru01G0063940.1 Terpenoid MVD medium pass
Mtru02G0058140.1 Terpenoid MVD low borderline
Mtru02G0058140.2 Terpenoid MVD low borderline
Mtru04G0001150.1 Terpenoid MVD low borderline
Mtru02G0001060.1 Terpenoid MVK low borderline
Mtru02G0014060.1 Terpenoid MVK low borderline
Mtru04G0064730.1 Terpenoid MVK low borderline
Mtru04G0064730.2 Terpenoid MVK low borderline
Mtru05G0058160.1 Terpenoid MVK low borderline
Mtru07G0058610.1 Terpenoid MVK medium pass
Mtru07G0058610.2 Terpenoid MVK medium pass
Mtru03G0048410.1 Terpenoid PMK medium pass
Mtru01G0025710.1 Terpenoid TPS medium pass
Mtru02G0003910.1 Terpenoid TPS medium pass
Mtru02G0005020.1 Terpenoid TPS low borderline
Mtru02G0005040.1 Terpenoid TPS low borderline
Mtru02G0034570.1 Terpenoid TPS medium pass
Mtru02G0034670.1 Terpenoid TPS medium pass
Mtru02G0034670.2 Terpenoid TPS medium pass
Mtru02G0034670.3 Terpenoid TPS medium pass
Mtru02G0034670.4 Terpenoid TPS medium pass
Mtru02G0034740.1 Terpenoid TPS medium pass
Mtru02G0035390.1 Terpenoid TPS medium pass
Mtru02G0042980.1 Terpenoid TPS medium pass
Mtru02G0042990.1 Terpenoid TPS medium pass
Mtru02G0043020.1 Terpenoid TPS medium pass
Mtru02G0043030.1 Terpenoid TPS medium pass
Mtru02G0047390.1 Terpenoid TPS medium pass
Mtru02G0047400.1 Terpenoid TPS medium pass
Mtru03G0005540.1 Terpenoid TPS medium pass
Mtru03G0013910.1 Terpenoid TPS medium pass
Mtru03G0021040.1 Terpenoid TPS medium pass
Mtru03G0023880.1 Terpenoid TPS medium pass
Mtru03G0023880.2 Terpenoid TPS medium pass
Mtru03G0023880.3 Terpenoid TPS medium pass
Mtru03G0023880.4 Terpenoid TPS medium pass
Mtru03G0023880.5 Terpenoid TPS medium pass
Mtru03G0027330.1 Terpenoid TPS medium pass
Mtru03G0027940.1 Terpenoid TPS medium pass
Mtru03G0030750.1 Terpenoid TPS medium pass
Mtru03G0030770.1 Terpenoid TPS medium pass
Mtru03G0030780.1 Terpenoid TPS medium pass
Mtru03G0030790.1 Terpenoid TPS medium pass
Mtru04G0008220.1 Terpenoid TPS medium pass