PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Mtru03G0055560.4 Flavonoid ANR low borderline
Mtru03G0058180.1 Flavonoid ANR low borderline
Mtru03G0058180.2 Flavonoid ANR low borderline
Mtru04G0010670.1 Flavonoid ANR medium borderline
Mtru04G0036550.1 Flavonoid ANR medium borderline
Mtru04G0036550.2 Flavonoid ANR medium borderline
Mtru04G0036560.1 Flavonoid ANR medium borderline
Mtru04G0039570.1 Flavonoid ANR medium borderline
Mtru04G0039570.2 Flavonoid ANR medium borderline
Mtru04G0046200.1 Flavonoid ANR medium borderline
Mtru05G0017810.1 Flavonoid ANR low borderline
Mtru05G0030690.1 Flavonoid ANR medium borderline
Mtru05G0039560.1 Flavonoid ANR medium borderline
Mtru06G0001410.1 Flavonoid ANR low borderline
Mtru06G0001410.2 Flavonoid ANR low borderline
Mtru07G0031720.1 Flavonoid ANR medium borderline
Mtru07G0031740.1 Flavonoid ANR medium borderline
Mtru07G0031780.1 Flavonoid ANR medium borderline
Mtru07G0031790.1 Flavonoid ANR medium borderline
Mtru07G0031820.1 Flavonoid ANR medium borderline
Mtru07G0031830.1 Flavonoid ANR medium borderline
Mtru07G0061020.1 Flavonoid ANR medium pass
Mtru07G0061020.2 Flavonoid ANR medium pass
Mtru07G0061020.3 Flavonoid ANR medium borderline
Mtru08G0030570.1 Flavonoid ANR medium borderline
Mtru08G0030570.4 Flavonoid ANR medium borderline
Mtru08G0030570.5 Flavonoid ANR medium borderline
Mtru08G0030570.6 Flavonoid ANR medium borderline
Mtru08G0030570.7 Flavonoid ANR medium borderline
Mtru08G0030800.1 Flavonoid ANR medium borderline
Mtru08G0030800.2 Flavonoid ANR medium borderline
Mtru08G0030800.3 Flavonoid ANR medium borderline
Mtru08G0030800.4 Flavonoid ANR medium borderline
Mtru08G0040510.1 Flavonoid ANR low borderline
Mtruscaffold01640012060.1 Flavonoid ANR medium borderline
Mtru01G0041070.1 Flavonoid ANS/LDOX medium borderline
Mtru02G0009270.1 Flavonoid ANS/LDOX medium borderline
Mtru02G0036000.1 Flavonoid ANS/LDOX medium pass
Mtru02G0036160.1 Flavonoid ANS/LDOX medium borderline
Mtru02G0037510.1 Flavonoid ANS/LDOX medium borderline
Mtru02G0038450.2 Flavonoid ANS/LDOX medium borderline
Mtru02G0038460.1 Flavonoid ANS/LDOX medium pass
Mtru03G0009520.1 Flavonoid ANS/LDOX medium borderline
Mtru03G0009520.2 Flavonoid ANS/LDOX medium borderline
Mtru03G0009520.3 Flavonoid ANS/LDOX medium borderline
Mtru03G0066740.1 Flavonoid ANS/LDOX medium borderline
Mtru04G0002590.1 Flavonoid ANS/LDOX low borderline
Mtru04G0012080.1 Flavonoid ANS/LDOX medium pass
Mtru04G0052020.1 Flavonoid ANS/LDOX low borderline
Mtru04G0071540.1 Flavonoid ANS/LDOX low borderline