PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Mtru05G0016330.1 Flavonoid ANS/LDOX medium borderline
Mtru05G0028600.2 Flavonoid ANS/LDOX medium borderline
Mtru07G0015630.1 Flavonoid ANS/LDOX low borderline
Mtru07G0021220.1 Flavonoid ANS/LDOX low borderline
Mtru07G0033850.1 Flavonoid ANS/LDOX medium borderline
Mtru08G0002770.1 Flavonoid ANS/LDOX low borderline
Mtru08G0026200.1 Flavonoid ANS/LDOX medium borderline
Mtruscaffold00090002340.1 Flavonoid ANS/LDOX medium pass
Mtruscaffold00090002350.2 Flavonoid ANS/LDOX medium borderline
Mtru02G0022230.1 Flavonoid C4H medium pass
Mtru02G0058310.1 Flavonoid C4H medium borderline
Mtru03G0029920.1 Flavonoid C4H low borderline
Mtru04G0011620.1 Flavonoid C4H low borderline
Mtru05G0041230.1 Flavonoid C4H medium borderline
Mtru05G0054200.1 Flavonoid C4H low borderline
Mtru07G0048350.1 Flavonoid C4H medium borderline
Mtru07G0048350.2 Flavonoid C4H medium borderline
Mtru07G0048350.3 Flavonoid C4H medium borderline
Mtru01G0005090.1 Flavonoid CHI low borderline
Mtru01G0005090.2 Flavonoid CHI low borderline
Mtru01G0066100.1 Flavonoid CHI medium pass
Mtru01G0066100.2 Flavonoid CHI medium pass
Mtru01G0066120.1 Flavonoid CHI medium pass
Mtru01G0066130.1 Flavonoid CHI medium pass
Mtru01G0066140.1 Flavonoid CHI medium pass
Mtru01G0066140.2 Flavonoid CHI medium pass
Mtru01G0066160.1 Flavonoid CHI medium pass
Mtru01G0066170.1 Flavonoid CHI medium pass
Mtru02G0038120.1 Flavonoid CHI low borderline
Mtru03G0050480.1 Flavonoid CHI medium pass
Mtru03G0050480.2 Flavonoid CHI medium pass
Mtru03G0050480.3 Flavonoid CHI medium pass
Mtru07G0011330.1 Flavonoid CHI medium pass
Mtru01G0054650.1 Flavonoid CHS medium pass
Mtru01G0054660.1 Flavonoid CHS medium pass
Mtru01G0054670.1 Flavonoid CHS medium pass
Mtru02G0031180.1 Flavonoid CHS medium pass
Mtru03G0043480.1 Flavonoid CHS medium pass
Mtru03G0043490.1 Flavonoid CHS medium pass
Mtru03G0045200.1 Flavonoid CHS medium pass
Mtru03G0047130.1 Flavonoid CHS medium pass
Mtru03G0047140.1 Flavonoid CHS medium pass
Mtru04G0035730.1 Flavonoid CHS medium pass
Mtru04G0037850.1 Flavonoid CHS medium pass
Mtru05G0002370.1 Flavonoid CHS medium pass
Mtru05G0002380.1 Flavonoid CHS medium pass
Mtru05G0002390.1 Flavonoid CHS medium pass
Mtru05G0002400.1 Flavonoid CHS medium pass
Mtru05G0002410.1 Flavonoid CHS medium pass
Mtru05G0002430.1 Flavonoid CHS medium pass