PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Mtru03G0005530.1 Rosmarinic Acid C4H low borderline
Mtru03G0007390.1 Rosmarinic Acid C4H medium pass
Mtru03G0009120.1 Rosmarinic Acid C4H medium pass
Mtru03G0009140.1 Rosmarinic Acid C4H medium pass
Mtru03G0009150.1 Rosmarinic Acid C4H low borderline
Mtru03G0009160.1 Rosmarinic Acid C4H low borderline
Mtru03G0014150.1 Rosmarinic Acid C4H medium pass
Mtru03G0014190.1 Rosmarinic Acid C4H low borderline
Mtru03G0023630.1 Rosmarinic Acid C4H low borderline
Mtru03G0023690.1 Rosmarinic Acid C4H medium pass
Mtru03G0023710.1 Rosmarinic Acid C4H medium pass
Mtru03G0023720.1 Rosmarinic Acid C4H medium pass
Mtru03G0023730.1 Rosmarinic Acid C4H medium pass
Mtru03G0023740.1 Rosmarinic Acid C4H low borderline
Mtru03G0023750.1 Rosmarinic Acid C4H low borderline
Mtru03G0023780.1 Rosmarinic Acid C4H low borderline
Mtru03G0023790.1 Rosmarinic Acid C4H low borderline
Mtru03G0023810.1 Rosmarinic Acid C4H low borderline
Mtru03G0023830.1 Rosmarinic Acid C4H low borderline
Mtru03G0023850.1 Rosmarinic Acid C4H low borderline
Mtru03G0023890.1 Rosmarinic Acid C4H low borderline
Mtru03G0023900.1 Rosmarinic Acid C4H medium pass
Mtru03G0023910.1 Rosmarinic Acid C4H low borderline
Mtru03G0023920.1 Rosmarinic Acid C4H medium pass
Mtru03G0023930.1 Rosmarinic Acid C4H low borderline
Mtru03G0023990.1 Rosmarinic Acid C4H low borderline
Mtru03G0024000.1 Rosmarinic Acid C4H low borderline
Mtru03G0024010.1 Rosmarinic Acid C4H low borderline
Mtru03G0028010.1 Rosmarinic Acid C4H low borderline
Mtru03G0029710.1 Rosmarinic Acid C4H low borderline
Mtru03G0029730.1 Rosmarinic Acid C4H low borderline
Mtru03G0029760.1 Rosmarinic Acid C4H low borderline
Mtru03G0029920.1 Rosmarinic Acid C4H low borderline
Mtru03G0030560.1 Rosmarinic Acid C4H low borderline
Mtru03G0034690.1 Rosmarinic Acid C4H low borderline
Mtru03G0036440.1 Rosmarinic Acid C4H low borderline
Mtru03G0038480.1 Rosmarinic Acid C4H low borderline
Mtru03G0038500.1 Rosmarinic Acid C4H low borderline
Mtru03G0038510.1 Rosmarinic Acid C4H medium pass
Mtru03G0039030.1 Rosmarinic Acid C4H low borderline
Mtru03G0041290.1 Rosmarinic Acid C4H low borderline
Mtru03G0050130.1 Rosmarinic Acid C4H low borderline
Mtru03G0057540.1 Rosmarinic Acid C4H low borderline
Mtru03G0057540.2 Rosmarinic Acid C4H low borderline
Mtru03G0063530.1 Rosmarinic Acid C4H low borderline
Mtru04G0000120.1 Rosmarinic Acid C4H low borderline
Mtru04G0007690.1 Rosmarinic Acid C4H low borderline
Mtru04G0011550.1 Rosmarinic Acid C4H medium pass
Mtru04G0011560.1 Rosmarinic Acid C4H low borderline
Mtru04G0011570.1 Rosmarinic Acid C4H low borderline