PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Mtru04G0011580.1 Rosmarinic Acid C4H medium pass
Mtru04G0011590.1 Rosmarinic Acid C4H medium pass
Mtru04G0011600.1 Rosmarinic Acid C4H medium pass
Mtru04G0011620.1 Rosmarinic Acid C4H low borderline
Mtru04G0011630.1 Rosmarinic Acid C4H medium pass
Mtru04G0011660.1 Rosmarinic Acid C4H medium pass
Mtru04G0015640.1 Rosmarinic Acid C4H low borderline
Mtru04G0020190.1 Rosmarinic Acid C4H low borderline
Mtru04G0023600.1 Rosmarinic Acid C4H low borderline
Mtru04G0025060.1 Rosmarinic Acid C4H medium pass
Mtru04G0027550.1 Rosmarinic Acid C4H medium pass
Mtru04G0027560.1 Rosmarinic Acid C4H low borderline
Mtru04G0027580.1 Rosmarinic Acid C4H low borderline
Mtru04G0033040.1 Rosmarinic Acid C4H low borderline
Mtru04G0033150.1 Rosmarinic Acid C4H medium pass
Mtru04G0035430.1 Rosmarinic Acid C4H low borderline
Mtru04G0036620.1 Rosmarinic Acid C4H medium pass
Mtru04G0037270.1 Rosmarinic Acid C4H low borderline
Mtru04G0042280.1 Rosmarinic Acid C4H low borderline
Mtru04G0042320.1 Rosmarinic Acid C4H low borderline
Mtru04G0043700.1 Rosmarinic Acid C4H low borderline
Mtru04G0043710.1 Rosmarinic Acid C4H low borderline
Mtru04G0043740.1 Rosmarinic Acid C4H low borderline
Mtru04G0043980.1 Rosmarinic Acid C4H low borderline
Mtru04G0043990.1 Rosmarinic Acid C4H medium pass
Mtru04G0044000.1 Rosmarinic Acid C4H low borderline
Mtru04G0044010.1 Rosmarinic Acid C4H medium pass
Mtru04G0044020.1 Rosmarinic Acid C4H medium pass
Mtru04G0044940.1 Rosmarinic Acid C4H medium pass
Mtru04G0044950.1 Rosmarinic Acid C4H low borderline
Mtru04G0044960.1 Rosmarinic Acid C4H low borderline
Mtru04G0045000.1 Rosmarinic Acid C4H medium pass
Mtru04G0049550.1 Rosmarinic Acid C4H medium pass
Mtru04G0049560.1 Rosmarinic Acid C4H low borderline
Mtru04G0050230.1 Rosmarinic Acid C4H medium pass
Mtru04G0053350.1 Rosmarinic Acid C4H medium pass
Mtru04G0053360.1 Rosmarinic Acid C4H low borderline
Mtru04G0053370.1 Rosmarinic Acid C4H medium pass
Mtru04G0054660.1 Rosmarinic Acid C4H low borderline
Mtru04G0054670.1 Rosmarinic Acid C4H medium pass
Mtru04G0054680.1 Rosmarinic Acid C4H medium pass
Mtru04G0054700.1 Rosmarinic Acid C4H medium pass
Mtru04G0054720.1 Rosmarinic Acid C4H low borderline
Mtru04G0054730.1 Rosmarinic Acid C4H medium pass
Mtru04G0057620.1 Rosmarinic Acid C4H medium pass
Mtru04G0059360.1 Rosmarinic Acid C4H low borderline
Mtru04G0063300.1 Rosmarinic Acid C4H low borderline
Mtru04G0070760.1 Rosmarinic Acid C4H low borderline
Mtru04G0072310.1 Rosmarinic Acid C4H low borderline
Mtru04G0072320.1 Rosmarinic Acid C4H low borderline