PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru05G0002140.1 Rosmarinic Acid C4H medium pass
Mtru05G0002150.1 Rosmarinic Acid C4H medium pass
Mtru05G0002210.1 Rosmarinic Acid C4H medium pass
Mtru05G0003450.1 Rosmarinic Acid C4H low borderline
Mtru05G0003450.3 Rosmarinic Acid C4H low borderline
Mtru05G0007310.1 Rosmarinic Acid C4H low borderline
Mtru05G0007320.1 Rosmarinic Acid C4H low borderline
Mtru05G0007330.1 Rosmarinic Acid C4H low borderline
Mtru05G0008620.1 Rosmarinic Acid C4H medium pass
Mtru05G0008630.1 Rosmarinic Acid C4H low borderline
Mtru05G0010030.1 Rosmarinic Acid C4H low borderline
Mtru05G0010050.1 Rosmarinic Acid C4H medium pass
Mtru05G0010350.1 Rosmarinic Acid C4H low borderline
Mtru05G0010360.1 Rosmarinic Acid C4H low borderline
Mtru05G0010370.1 Rosmarinic Acid C4H low borderline
Mtru05G0010490.1 Rosmarinic Acid C4H low borderline
Mtru05G0011010.1 Rosmarinic Acid C4H low borderline
Mtru05G0011010.2 Rosmarinic Acid C4H low borderline
Mtru05G0011900.1 Rosmarinic Acid C4H low borderline
Mtru05G0012010.1 Rosmarinic Acid C4H medium pass
Mtru05G0013640.1 Rosmarinic Acid C4H medium pass
Mtru05G0015110.1 Rosmarinic Acid C4H low borderline
Mtru05G0015110.2 Rosmarinic Acid C4H low borderline
Mtru05G0015810.1 Rosmarinic Acid C4H low borderline
Mtru05G0021020.1 Rosmarinic Acid C4H low borderline
Mtru05G0027080.1 Rosmarinic Acid C4H low borderline
Mtru05G0027400.1 Rosmarinic Acid C4H low borderline
Mtru05G0030760.1 Rosmarinic Acid C4H low borderline
Mtru05G0038320.1 Rosmarinic Acid C4H low borderline
Mtru05G0038330.1 Rosmarinic Acid C4H medium pass
Mtru05G0038350.1 Rosmarinic Acid C4H low borderline
Mtru05G0038370.1 Rosmarinic Acid C4H low borderline
Mtru05G0038400.1 Rosmarinic Acid C4H low borderline
Mtru05G0038410.1 Rosmarinic Acid C4H low borderline
Mtru05G0038420.1 Rosmarinic Acid C4H medium pass
Mtru05G0038430.1 Rosmarinic Acid C4H low borderline
Mtru05G0038440.1 Rosmarinic Acid C4H medium pass
Mtru05G0038470.1 Rosmarinic Acid C4H low borderline
Mtru05G0038480.1 Rosmarinic Acid C4H low borderline
Mtru05G0039710.1 Rosmarinic Acid C4H low borderline
Mtru05G0039750.1 Rosmarinic Acid C4H low borderline
Mtru05G0039780.1 Rosmarinic Acid C4H low borderline
Mtru05G0039870.1 Rosmarinic Acid C4H low borderline
Mtru05G0039890.1 Rosmarinic Acid C4H low borderline
Mtru05G0039900.1 Rosmarinic Acid C4H low borderline
Mtru05G0039960.1 Rosmarinic Acid C4H low borderline
Mtru05G0041230.1 Rosmarinic Acid C4H medium pass
Mtru05G0045840.1 Rosmarinic Acid C4H low borderline
Mtru05G0052600.1 Rosmarinic Acid C4H low borderline
Mtru05G0052900.1 Rosmarinic Acid C4H low borderline