PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru05G0054200.1 Rosmarinic Acid C4H low borderline
Mtru05G0054210.1 Rosmarinic Acid C4H medium pass
Mtru05G0054640.1 Rosmarinic Acid C4H low borderline
Mtru05G0054650.1 Rosmarinic Acid C4H medium pass
Mtru05G0054660.1 Rosmarinic Acid C4H medium pass
Mtru05G0054670.1 Rosmarinic Acid C4H low borderline
Mtru05G0054670.2 Rosmarinic Acid C4H low borderline
Mtru05G0054690.1 Rosmarinic Acid C4H low borderline
Mtru05G0054700.1 Rosmarinic Acid C4H low borderline
Mtru05G0054710.1 Rosmarinic Acid C4H low borderline
Mtru05G0054720.1 Rosmarinic Acid C4H low borderline
Mtru05G0054730.1 Rosmarinic Acid C4H low borderline
Mtru05G0054820.1 Rosmarinic Acid C4H low borderline
Mtru05G0054830.1 Rosmarinic Acid C4H low borderline
Mtru05G0054970.1 Rosmarinic Acid C4H low borderline
Mtru05G0055240.1 Rosmarinic Acid C4H low borderline
Mtru05G0055280.1 Rosmarinic Acid C4H low borderline
Mtru05G0055310.1 Rosmarinic Acid C4H low borderline
Mtru06G0003020.1 Rosmarinic Acid C4H low borderline
Mtru06G0003060.1 Rosmarinic Acid C4H low borderline
Mtru06G0003080.1 Rosmarinic Acid C4H low borderline
Mtru06G0003110.1 Rosmarinic Acid C4H low borderline
Mtru06G0003120.1 Rosmarinic Acid C4H low borderline
Mtru06G0003130.1 Rosmarinic Acid C4H low borderline
Mtru06G0003140.1 Rosmarinic Acid C4H low borderline
Mtru06G0003150.1 Rosmarinic Acid C4H low borderline
Mtru06G0009170.1 Rosmarinic Acid C4H low borderline
Mtru06G0010270.1 Rosmarinic Acid C4H low borderline
Mtru06G0015500.1 Rosmarinic Acid C4H low borderline
Mtru06G0015540.1 Rosmarinic Acid C4H low borderline
Mtru06G0015620.1 Rosmarinic Acid C4H low borderline
Mtru06G0015630.1 Rosmarinic Acid C4H low borderline
Mtru06G0017750.1 Rosmarinic Acid C4H low borderline
Mtru06G0018240.1 Rosmarinic Acid C4H low borderline
Mtru06G0018270.1 Rosmarinic Acid C4H low borderline
Mtru06G0024870.1 Rosmarinic Acid C4H low borderline
Mtru06G0027370.1 Rosmarinic Acid C4H low borderline
Mtru06G0027370.2 Rosmarinic Acid C4H low borderline
Mtru06G0029260.1 Rosmarinic Acid C4H low borderline
Mtru06G0034600.1 Rosmarinic Acid C4H low borderline
Mtru06G0034610.1 Rosmarinic Acid C4H medium pass
Mtru06G0034650.1 Rosmarinic Acid C4H medium pass
Mtru06G0034660.1 Rosmarinic Acid C4H low borderline
Mtru07G0001380.2 Rosmarinic Acid C4H low borderline
Mtru07G0004500.1 Rosmarinic Acid C4H low borderline
Mtru07G0004520.1 Rosmarinic Acid C4H low borderline
Mtru07G0011570.1 Rosmarinic Acid C4H low borderline
Mtru07G0011590.1 Rosmarinic Acid C4H low borderline
Mtru07G0013730.1 Rosmarinic Acid C4H low borderline
Mtru07G0020360.1 Rosmarinic Acid C4H low borderline