PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru07G0020360.2 Rosmarinic Acid C4H low borderline
Mtru07G0020770.1 Rosmarinic Acid C4H low borderline
Mtru07G0032160.1 Rosmarinic Acid C4H low borderline
Mtru07G0032180.1 Rosmarinic Acid C4H low borderline
Mtru07G0032200.1 Rosmarinic Acid C4H medium pass
Mtru07G0032210.1 Rosmarinic Acid C4H low borderline
Mtru07G0032230.1 Rosmarinic Acid C4H low borderline
Mtru07G0032240.1 Rosmarinic Acid C4H low borderline
Mtru07G0032260.1 Rosmarinic Acid C4H medium pass
Mtru07G0035140.1 Rosmarinic Acid C4H low borderline
Mtru07G0040840.1 Rosmarinic Acid C4H low borderline
Mtru07G0041320.1 Rosmarinic Acid C4H low borderline
Mtru07G0042190.1 Rosmarinic Acid C4H low borderline
Mtru07G0044450.1 Rosmarinic Acid C4H low borderline
Mtru07G0044470.1 Rosmarinic Acid C4H medium pass
Mtru07G0048350.1 Rosmarinic Acid C4H low borderline
Mtru07G0048350.2 Rosmarinic Acid C4H low borderline
Mtru07G0048350.3 Rosmarinic Acid C4H low borderline
Mtru07G0051660.1 Rosmarinic Acid C4H medium pass
Mtru08G0002280.1 Rosmarinic Acid C4H low borderline
Mtru08G0005220.1 Rosmarinic Acid C4H low borderline
Mtru08G0005230.1 Rosmarinic Acid C4H low borderline
Mtru08G0005800.1 Rosmarinic Acid C4H low borderline
Mtru08G0007130.1 Rosmarinic Acid C4H low borderline
Mtru08G0007740.1 Rosmarinic Acid C4H low borderline
Mtru08G0008000.1 Rosmarinic Acid C4H low borderline
Mtru08G0010270.1 Rosmarinic Acid C4H medium pass
Mtru08G0010280.1 Rosmarinic Acid C4H low borderline
Mtru08G0010290.1 Rosmarinic Acid C4H low borderline
Mtru08G0012520.1 Rosmarinic Acid C4H low borderline
Mtru08G0017240.1 Rosmarinic Acid C4H low borderline
Mtru08G0017240.2 Rosmarinic Acid C4H low borderline
Mtru08G0017300.1 Rosmarinic Acid C4H low borderline
Mtru08G0017310.1 Rosmarinic Acid C4H low borderline
Mtru08G0017330.1 Rosmarinic Acid C4H low borderline
Mtru08G0017330.2 Rosmarinic Acid C4H low borderline
Mtru08G0017330.3 Rosmarinic Acid C4H low borderline
Mtru08G0017340.1 Rosmarinic Acid C4H low borderline
Mtru08G0017350.1 Rosmarinic Acid C4H low borderline
Mtru08G0017660.1 Rosmarinic Acid C4H low borderline
Mtru08G0020710.1 Rosmarinic Acid C4H low borderline
Mtru08G0020730.1 Rosmarinic Acid C4H low borderline
Mtru08G0020730.2 Rosmarinic Acid C4H low borderline
Mtru08G0023010.1 Rosmarinic Acid C4H medium pass
Mtru08G0023040.1 Rosmarinic Acid C4H medium pass
Mtru08G0027930.1 Rosmarinic Acid C4H low borderline
Mtru08G0029390.1 Rosmarinic Acid C4H medium pass
Mtru08G0029680.1 Rosmarinic Acid C4H medium pass
Mtru08G0029710.1 Rosmarinic Acid C4H low borderline
Mtru08G0031340.1 Rosmarinic Acid C4H low borderline