PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0031360.1 Rosmarinic Acid C4H low borderline
Mtru08G0036730.1 Rosmarinic Acid C4H low borderline
Mtru08G0036730.4 Rosmarinic Acid C4H low borderline
Mtru08G0037720.1 Rosmarinic Acid C4H low borderline
Mtru08G0037730.1 Rosmarinic Acid C4H low borderline
Mtru08G0039260.1 Rosmarinic Acid C4H medium pass
Mtru08G0039320.1 Rosmarinic Acid C4H low borderline
Mtru08G0039350.1 Rosmarinic Acid C4H low borderline
Mtru08G0039430.1 Rosmarinic Acid C4H low borderline
Mtru08G0039710.1 Rosmarinic Acid C4H low borderline
Mtru08G0040370.1 Rosmarinic Acid C4H low borderline
Mtru08G0042310.1 Rosmarinic Acid C4H low borderline
Mtru08G0042310.2 Rosmarinic Acid C4H low borderline
Mtru08G0046570.1 Rosmarinic Acid C4H low borderline
Mtru08G0047710.1 Rosmarinic Acid C4H low borderline
Mtru08G0047720.1 Rosmarinic Acid C4H low borderline
Mtru08G0048470.1 Rosmarinic Acid C4H low borderline
Mtru08G0051770.1 Rosmarinic Acid C4H low borderline
Mtru08G0053590.1 Rosmarinic Acid C4H low borderline
Mtru08G0055510.1 Rosmarinic Acid C4H medium pass
Mtru08G0055520.1 Rosmarinic Acid C4H low borderline
Mtru08G0055530.1 Rosmarinic Acid C4H medium pass
Mtruscaffold00220003990.1 Rosmarinic Acid C4H medium pass
Mtruscaffold00450006390.1 Rosmarinic Acid C4H low borderline
Mtruscaffold00450006390.2 Rosmarinic Acid C4H low borderline
Mtruscaffold00450006400.1 Rosmarinic Acid C4H low borderline
Mtruscaffold00450006400.2 Rosmarinic Acid C4H low borderline
Mtruscaffold00590007640.1 Rosmarinic Acid C4H low borderline
Mtruscaffold01470011440.1 Rosmarinic Acid C4H low borderline
Mtruscaffold01550011830.1 Rosmarinic Acid C4H low borderline
Mtruscaffold01710012240.1 Rosmarinic Acid C4H medium pass
Mtruscaffold01710012250.1 Rosmarinic Acid C4H low borderline
Mtruscaffold01710012260.1 Rosmarinic Acid C4H low borderline
Mtruscaffold01810012560.1 Rosmarinic Acid C4H low borderline
Mtruscaffold02870015020.1 Rosmarinic Acid C4H low borderline
Mtruscaffold04080017110.1 Rosmarinic Acid C4H medium pass
Mtruscaffold04510017810.1 Rosmarinic Acid C4H medium pass
Mtruscaffold05540018910.1 Rosmarinic Acid C4H low borderline
Mtruscaffold06080019430.1 Rosmarinic Acid C4H low borderline
Mtruscaffold06380019680.1 Rosmarinic Acid C4H low borderline
Mtruscaffold07270020570.1 Rosmarinic Acid C4H low borderline
Mtruscaffold17500024550.1 Rosmarinic Acid C4H medium pass
Mtru01G0058090.1 Rosmarinic Acid CPR low borderline
Mtru01G0058090.2 Rosmarinic Acid CPR low borderline
Mtru01G0058090.3 Rosmarinic Acid CPR low borderline
Mtru01G0058090.4 Rosmarinic Acid CPR low borderline
Mtru01G0058090.5 Rosmarinic Acid CPR low borderline
Mtru01G0058090.6 Rosmarinic Acid CPR low borderline
Mtru01G0058090.7 Rosmarinic Acid CPR low borderline
Mtru01G0060020.1 Rosmarinic Acid CPR low borderline