PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
OBART11G12830.2 Steroid SMT1/SMT2/SMT3 medium pass
OBART11G12830.3 Steroid SMT1/SMT2/SMT3 medium pass
OBART11G12850.3 Steroid SMT1/SMT2/SMT3 medium pass
OBART11G12850.4 Steroid SMT1/SMT2/SMT3 medium pass
OBART11G15150.1 Steroid SMT1/SMT2/SMT3 low borderline
OBART11G21030.1 Steroid SMT1/SMT2/SMT3 medium pass
OBART12G07440.1 Steroid SMT1/SMT2/SMT3 medium pass
OBART12G16980.1 Steroid SMT1/SMT2/SMT3 medium pass
OBART12G18330.1 Steroid SMT1/SMT2/SMT3 medium pass
OBART03G09430.1 Steroid SQE medium pass
OBART03G09440.1 Steroid SQE medium pass
OBART11G01130.1 Steroid SQE low borderline
OBART03G38000.1 Steroid SQS/FDFT1 medium pass
OBART03G38000.2 Steroid SQS/FDFT1 medium pass
OBART06G00230.1 Steroid SQS/FDFT1 low borderline
OBART06G28180.1 Steroid SQS/FDFT1 medium pass
OBART07G06500.1 Steroid SQS/FDFT1 high pass
OBART07G06500.2 Steroid SQS/FDFT1 high pass
OBART09G19150.1 Steroid SQS/FDFT1 medium pass
OBART09G19150.2 Steroid SQS/FDFT1 medium pass
OBART12G19460.1 Steroid SQS/FDFT1 medium pass
OBART01G00760.1 Terpenoid AACT medium borderline
OBART02G07380.1 Terpenoid AACT low borderline
OBART02G07380.2 Terpenoid AACT low borderline
OBART02G37360.1 Terpenoid AACT medium borderline
OBART06G18970.1 Terpenoid AACT low borderline
OBART07G00410.1 Terpenoid AACT low borderline
OBART09G02290.1 Terpenoid AACT medium borderline
OBART09G02290.2 Terpenoid AACT medium borderline
OBART10G12270.1 Terpenoid AACT medium borderline
OBART01G00390.1 Terpenoid BAHD medium pass
OBART01G03840.1 Terpenoid BAHD medium pass
OBART01G05110.1 Terpenoid BAHD medium pass
OBART01G05570.1 Terpenoid BAHD medium pass
OBART01G09580.1 Terpenoid BAHD low borderline
OBART01G11280.1 Terpenoid BAHD medium pass
OBART01G11280.2 Terpenoid BAHD medium pass
OBART01G12110.1 Terpenoid BAHD low borderline
OBART01G12200.1 Terpenoid BAHD low borderline
OBART01G12590.1 Terpenoid BAHD medium pass
OBART01G13090.1 Terpenoid BAHD low borderline
OBART01G13870.1 Terpenoid BAHD medium pass
OBART01G14030.1 Terpenoid BAHD medium pass
OBART01G14050.1 Terpenoid BAHD low borderline
OBART01G14050.2 Terpenoid BAHD low borderline
OBART01G14720.1 Terpenoid BAHD medium pass
OBART01G16160.1 Terpenoid BAHD medium pass
OBART01G20840.1 Terpenoid BAHD medium pass
OBART01G22700.1 Terpenoid BAHD medium pass
OBART01G23510.1 Terpenoid BAHD low borderline