PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
OBART01G07090.1 Steroid DWF4/CYP90B1 low borderline
OBART01G07100.1 Steroid DWF4/CYP90B1 low borderline
OBART01G07110.1 Steroid DWF4/CYP90B1 medium borderline
OBART01G07980.1 Steroid DWF4/CYP90B1 low borderline
OBART01G14710.1 Steroid DWF4/CYP90B1 low borderline
OBART01G21840.1 Steroid DWF4/CYP90B1 low borderline
OBART01G21840.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23440.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23450.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23450.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.1 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.2 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.3 Steroid DWF4/CYP90B1 low borderline
OBART01G23460.4 Steroid DWF4/CYP90B1 low borderline
OBART01G23470.1 Steroid DWF4/CYP90B1 low borderline
OBART01G29620.1 Steroid DWF4/CYP90B1 low borderline
OBART01G34240.1 Steroid DWF4/CYP90B1 low borderline
OBART01G34250.1 Steroid DWF4/CYP90B1 low borderline
OBART01G37920.1 Steroid DWF4/CYP90B1 low borderline
OBART01G44040.1 Steroid DWF4/CYP90B1 low borderline
OBART02G05540.1 Steroid DWF4/CYP90B1 low borderline
OBART02G05540.2 Steroid DWF4/CYP90B1 low borderline
OBART02G05540.3 Steroid DWF4/CYP90B1 low borderline
OBART02G07960.1 Steroid DWF4/CYP90B1 medium borderline
OBART02G12230.1 Steroid DWF4/CYP90B1 low borderline
OBART02G17500.1 Steroid DWF4/CYP90B1 low borderline
OBART02G17540.1 Steroid DWF4/CYP90B1 low borderline
OBART02G17560.1 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.1 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.2 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.3 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.4 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.5 Steroid DWF4/CYP90B1 low borderline
OBART02G37380.6 Steroid DWF4/CYP90B1 low borderline
OBART02G37850.1 Steroid DWF4/CYP90B1 low borderline
OBART03G03140.1 Steroid DWF4/CYP90B1 low borderline
OBART03G03160.1 Steroid DWF4/CYP90B1 low borderline
OBART03G03170.1 Steroid DWF4/CYP90B1 low borderline
OBART03G10580.1 Steroid DWF4/CYP90B1 low borderline
OBART03G18460.1 Steroid DWF4/CYP90B1 low borderline
OBART03G18810.1 Steroid DWF4/CYP90B1 low borderline
OBART03G18840.1 Steroid DWF4/CYP90B1 low borderline
OBART03G18840.3 Steroid DWF4/CYP90B1 low borderline
OBART03G18840.4 Steroid DWF4/CYP90B1 low borderline
OBART03G18910.1 Steroid DWF4/CYP90B1 low borderline
OBART03G22840.1 Steroid DWF4/CYP90B1 low borderline
OBART03G23480.1 Steroid DWF4/CYP90B1 low borderline
OBART03G25000.1 Steroid DWF4/CYP90B1 low borderline
OBART03G25030.1 Steroid DWF4/CYP90B1 low borderline
OBART03G28200.1 Steroid DWF4/CYP90B1 medium borderline