PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
OBART01G07110.1 Flavonoid FNS low borderline
OBART01G07980.1 Flavonoid FNS medium borderline
OBART01G08000.1 Flavonoid FNS medium borderline
OBART01G14730.1 Flavonoid FNS medium borderline
OBART01G44040.1 Flavonoid FNS medium borderline
OBART02G05540.1 Flavonoid FNS medium borderline
OBART02G05540.2 Flavonoid FNS medium borderline
OBART02G05540.3 Flavonoid FNS medium borderline
OBART02G09090.1 Flavonoid FNS medium borderline
OBART02G17540.2 Flavonoid FNS medium borderline
OBART02G27650.1 Flavonoid FNS medium borderline
OBART03G22840.1 Flavonoid FNS medium borderline
OBART03G34950.1 Flavonoid FNS medium borderline
OBART03G40080.1 Flavonoid FNS medium borderline
OBART04G01300.1 Flavonoid FNS medium borderline
OBART05G05430.1 Flavonoid FNS medium borderline
OBART05G13350.1 Flavonoid FNS medium borderline
OBART05G16580.1 Flavonoid FNS medium borderline
OBART05G16590.1 Flavonoid FNS medium borderline
OBART05G22660.1 Flavonoid FNS medium borderline
OBART06G18780.1 Flavonoid FNS medium borderline
OBART06G18930.1 Flavonoid FNS medium borderline
OBART06G18930.2 Flavonoid FNS medium borderline
OBART06G18990.1 Flavonoid FNS medium borderline
OBART07G12980.1 Flavonoid FNS medium borderline
OBART07G16410.1 Flavonoid FNS medium borderline
OBART07G19050.1 Flavonoid FNS medium borderline
OBART08G08160.1 Flavonoid FNS medium borderline
OBART08G22600.1 Flavonoid FNS medium borderline
OBART09G07510.1 Flavonoid FNS low borderline
OBART09G17380.1 Flavonoid FNS medium borderline
OBART10G08170.1 Flavonoid FNS medium borderline
OBART10G08170.2 Flavonoid FNS medium borderline
OBART10G15460.1 Flavonoid FNS medium borderline
OBART10G15510.1 Flavonoid FNS medium borderline
OBART11G13630.1 Flavonoid FNS medium borderline
OBART11G15310.1 Flavonoid FNS medium borderline
OBART11G20600.1 Flavonoid FNS medium borderline
OBART12G20240.1 Flavonoid FNS medium borderline