PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
Reset
Gene Pathway Family Confidence Status
OBART01G13170.1 Phenylpropanoid CSE medium pass
OBART01G14570.1 Phenylpropanoid CSE medium pass
OBART01G14580.1 Phenylpropanoid CSE medium pass
OBART01G22600.1 Phenylpropanoid CSE medium pass
OBART01G22610.1 Phenylpropanoid CSE medium pass
OBART01G27020.1 Phenylpropanoid CSE medium pass
OBART01G40140.1 Phenylpropanoid CSE low borderline
OBART01G40140.2 Phenylpropanoid CSE low borderline
OBART01G41110.1 Phenylpropanoid CSE medium pass
OBART01G45380.1 Phenylpropanoid CSE medium pass
OBART02G08130.1 Phenylpropanoid CSE medium pass
OBART02G16360.1 Phenylpropanoid CSE medium pass
OBART02G30130.1 Phenylpropanoid CSE medium pass
OBART04G04160.1 Phenylpropanoid CSE medium pass
OBART04G04180.1 Phenylpropanoid CSE low borderline
OBART04G07190.1 Phenylpropanoid CSE medium pass
OBART04G27610.1 Phenylpropanoid CSE medium pass
OBART04G29040.1 Phenylpropanoid CSE medium pass
OBART04G29060.1 Phenylpropanoid CSE medium pass
OBART05G00610.1 Phenylpropanoid CSE medium pass
OBART05G13480.1 Phenylpropanoid CSE medium pass
OBART05G13480.2 Phenylpropanoid CSE medium pass
OBART05G28240.1 Phenylpropanoid CSE medium pass
OBART07G00680.1 Phenylpropanoid CSE low borderline
OBART07G18960.1 Phenylpropanoid CSE medium pass
OBART08G02110.1 Phenylpropanoid CSE medium pass
OBART08G23320.1 Phenylpropanoid CSE medium pass
OBART09G11840.1 Phenylpropanoid CSE medium pass
OBART09G11840.2 Phenylpropanoid CSE medium pass
OBART09G15180.1 Phenylpropanoid CSE medium pass
OBART09G19680.1 Phenylpropanoid CSE medium pass
OBART09G19810.1 Phenylpropanoid CSE medium pass
OBART09G19820.1 Phenylpropanoid CSE medium pass
OBART09G19830.1 Phenylpropanoid CSE low borderline
OBART09G19850.1 Phenylpropanoid CSE medium pass
OBART11G08490.1 Phenylpropanoid CSE medium pass
OBART12G05760.1 Phenylpropanoid CSE medium pass
OBART12G08240.1 Phenylpropanoid CSE medium pass