PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

1727
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
OBART01G08000.1 Alkaloid G8O/G8H medium borderline
OBART01G19690.1 Alkaloid G8O/G8H medium borderline
OBART02G00700.1 Alkaloid G8O/G8H medium borderline
OBART02G00700.2 Alkaloid G8O/G8H medium borderline
OBART02G12230.2 Alkaloid G8O/G8H medium borderline
OBART02G12230.3 Alkaloid G8O/G8H medium borderline
OBART02G14140.1 Alkaloid G8O/G8H medium borderline
OBART02G17540.2 Alkaloid G8O/G8H low borderline
OBART03G00990.1 Alkaloid G8O/G8H medium borderline
OBART03G10680.1 Alkaloid G8O/G8H medium borderline
OBART03G18460.1 Alkaloid G8O/G8H medium borderline
OBART03G33640.1 Alkaloid G8O/G8H medium pass
OBART03G34950.1 Alkaloid G8O/G8H medium borderline
OBART03G34950.4 Alkaloid G8O/G8H medium borderline
OBART04G05400.1 Alkaloid G8O/G8H medium borderline
OBART04G20190.1 Alkaloid G8O/G8H medium borderline
OBART05G11670.1 Alkaloid G8O/G8H low borderline
OBART06G11550.1 Alkaloid G8O/G8H medium borderline
OBART06G17740.1 Alkaloid G8O/G8H low borderline
OBART06G18990.1 Alkaloid G8O/G8H medium borderline
OBART06G19000.1 Alkaloid G8O/G8H medium borderline
OBART06G19000.2 Alkaloid G8O/G8H medium borderline
OBART07G07350.1 Alkaloid G8O/G8H medium borderline
OBART07G10640.1 Alkaloid G8O/G8H medium borderline
OBART07G12970.1 Alkaloid G8O/G8H medium borderline
OBART07G12980.1 Alkaloid G8O/G8H medium borderline
OBART08G00400.1 Alkaloid G8O/G8H medium borderline
OBART08G03080.1 Alkaloid G8O/G8H medium borderline
OBART08G17500.1 Alkaloid G8O/G8H medium borderline
OBART08G19920.1 Alkaloid G8O/G8H medium borderline
OBART09G12160.1 Alkaloid G8O/G8H medium borderline
OBART09G17630.1 Alkaloid G8O/G8H low borderline
OBART10G01970.1 Alkaloid G8O/G8H medium borderline
OBART10G02230.1 Alkaloid G8O/G8H medium borderline
OBART10G03490.1 Alkaloid G8O/G8H medium borderline
OBART10G04360.1 Alkaloid G8O/G8H medium borderline
OBART10G06900.1 Alkaloid G8O/G8H medium borderline
OBART10G15510.1 Alkaloid G8O/G8H medium borderline
OBART10G15590.1 Alkaloid G8O/G8H medium borderline
OBART10G15600.1 Alkaloid G8O/G8H medium borderline
OBART10G15620.1 Alkaloid G8O/G8H medium borderline
OBART10G15670.1 Alkaloid G8O/G8H medium borderline
OBART10G16350.1 Alkaloid G8O/G8H medium borderline
OBART11G02300.1 Alkaloid G8O/G8H low borderline
OBART11G10900.1 Alkaloid G8O/G8H medium borderline
OBART11G13630.1 Alkaloid G8O/G8H medium borderline
OBART12G05550.1 Alkaloid G8O/G8H medium borderline
OBART12G20240.1 Alkaloid G8O/G8H medium borderline