PlantSME Plant secondary metabolism enzyme database

Oryza barthii (oryza_barthii)

Imported from atlas release summary for Oryza barthii.

2196
Candidate Protein Records
1727
Pathway-Level Records
4621
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 508 19 BAHD (188) View species results
Alkaloid pathway 436 26 7DLGT (63) View species results
Phenylpropanoid pathway 274 12 POD (93) View species results
Flavonoid pathway 242 12 UFGT (132) View species results
Rosmarinic acid pathway 140 7 C4H (68) View species results
Steroid pathway 127 14 CAS (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1780 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 344 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
OBART12G11370.1 Terpenoid BAHD medium pass
OBART12G11430.1 Terpenoid BAHD medium pass
OBART12G12020.1 Terpenoid BAHD low borderline
OBART12G15900.1 Terpenoid BAHD medium pass
OBART12G16980.1 Terpenoid BAHD medium pass
OBART01G34170.1 Terpenoid CMK/IspE high pass
OBART12G09910.1 Terpenoid CMK/IspE low borderline
OBART01G11890.1 Terpenoid CYP71 medium pass
OBART01G15960.1 Terpenoid CYP71 medium borderline
OBART01G17600.1 Terpenoid CYP71 medium borderline
OBART01G44410.1 Terpenoid CYP71 low borderline
OBART02G01620.1 Terpenoid CYP71 medium pass
OBART02G05540.1 Terpenoid CYP71 low borderline
OBART02G05540.2 Terpenoid CYP71 low borderline
OBART02G05540.3 Terpenoid CYP71 low borderline
OBART02G06380.1 Terpenoid CYP71 medium borderline
OBART02G06380.2 Terpenoid CYP71 medium borderline
OBART02G06400.1 Terpenoid CYP71 medium borderline
OBART02G06420.1 Terpenoid CYP71 medium borderline
OBART02G06450.1 Terpenoid CYP71 medium borderline
OBART02G06450.2 Terpenoid CYP71 low borderline
OBART02G06450.3 Terpenoid CYP71 low borderline
OBART02G06480.1 Terpenoid CYP71 medium borderline
OBART02G06490.1 Terpenoid CYP71 low borderline
OBART02G06530.1 Terpenoid CYP71 low borderline
OBART02G07910.1 Terpenoid CYP71 low borderline
OBART02G07910.3 Terpenoid CYP71 low borderline
OBART02G07910.4 Terpenoid CYP71 low borderline
OBART02G08790.1 Terpenoid CYP71 low borderline
OBART02G14940.1 Terpenoid CYP71 medium borderline
OBART02G18970.1 Terpenoid CYP71 low borderline
OBART02G21260.1 Terpenoid CYP71 medium borderline
OBART02G21270.1 Terpenoid CYP71 medium borderline
OBART02G23050.1 Terpenoid CYP71 medium borderline
OBART02G33420.1 Terpenoid CYP71 low borderline
OBART03G07260.1 Terpenoid CYP71 low borderline
OBART03G23480.1 Terpenoid CYP71 medium borderline
OBART03G24910.1 Terpenoid CYP71 medium borderline
OBART03G25000.1 Terpenoid CYP71 medium borderline
OBART03G25030.1 Terpenoid CYP71 medium borderline
OBART03G41040.1 Terpenoid CYP71 medium borderline
OBART04G02870.1 Terpenoid CYP71 medium borderline
OBART04G02940.1 Terpenoid CYP71 medium borderline
OBART05G00200.1 Terpenoid CYP71 medium pass
OBART06G01830.1 Terpenoid CYP71 medium pass
OBART06G07420.1 Terpenoid CYP71 low borderline
OBART06G07420.2 Terpenoid CYP71 low borderline
OBART06G12960.1 Terpenoid CYP71 medium borderline
OBART06G15950.1 Terpenoid CYP71 medium borderline
OBART06G22330.1 Terpenoid CYP71 low borderline