PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Oglu05G0013950.1 Rosmarinic Acid C4H medium pass
Oglu05G0014720.1 Rosmarinic Acid C4H low borderline
Oglu05G0014720.2 Rosmarinic Acid C4H low borderline
Oglu05G0016670.1 Rosmarinic Acid C4H low borderline
Oglu05G0017310.1 Rosmarinic Acid C4H low borderline
Oglu05G0017840.1 Rosmarinic Acid C4H medium pass
Oglu05G0021460.1 Rosmarinic Acid C4H low borderline
Oglu05G0022280.1 Rosmarinic Acid C4H medium pass
Oglu05G0023680.1 Rosmarinic Acid C4H medium pass
Oglu06G0000050.1 Rosmarinic Acid C4H low borderline
Oglu06G0000530.1 Rosmarinic Acid C4H low borderline
Oglu06G0001770.1 Rosmarinic Acid C4H low borderline
Oglu06G0006100.1 Rosmarinic Acid C4H low borderline
Oglu06G0006110.1 Rosmarinic Acid C4H low borderline
Oglu06G0006940.1 Rosmarinic Acid C4H medium pass
Oglu06G0011020.1 Rosmarinic Acid C4H low borderline
Oglu06G0012310.1 Rosmarinic Acid C4H medium pass
Oglu06G0013790.1 Rosmarinic Acid C4H medium pass
Oglu06G0013920.1 Rosmarinic Acid C4H low borderline
Oglu06G0013970.1 Rosmarinic Acid C4H medium pass
Oglu06G0014930.1 Rosmarinic Acid C4H low borderline
Oglu06G0016630.1 Rosmarinic Acid C4H low borderline
Oglu06G0016630.2 Rosmarinic Acid C4H low borderline
Oglu06G0019640.1 Rosmarinic Acid C4H low borderline
Oglu06G0019830.1 Rosmarinic Acid C4H low borderline
Oglu06G0019830.2 Rosmarinic Acid C4H low borderline
Oglu06G0019860.1 Rosmarinic Acid C4H low borderline
Oglu06G0019860.2 Rosmarinic Acid C4H low borderline
Oglu06G0019860.3 Rosmarinic Acid C4H low borderline
Oglu06G0019900.1 Rosmarinic Acid C4H low borderline
Oglu06G0019900.2 Rosmarinic Acid C4H low borderline
Oglu06G0020950.1 Rosmarinic Acid C4H low borderline
Oglu06G0021780.1 Rosmarinic Acid C4H medium pass
Oglu06G0022610.1 Rosmarinic Acid C4H low borderline
Oglu06G0023120.1 Rosmarinic Acid C4H low borderline
Oglu06G0023130.1 Rosmarinic Acid C4H medium pass
Oglu06G0023140.1 Rosmarinic Acid C4H medium pass
Oglu06G0023150.1 Rosmarinic Acid C4H low borderline
Oglu06G0023150.2 Rosmarinic Acid C4H low borderline
Oglu06G0023160.1 Rosmarinic Acid C4H medium pass
Oglu06G0023170.1 Rosmarinic Acid C4H low borderline
Oglu06G0023170.2 Rosmarinic Acid C4H medium pass
Oglu06G0023170.3 Rosmarinic Acid C4H medium pass
Oglu06G0023180.1 Rosmarinic Acid C4H low borderline
Oglu06G0023190.1 Rosmarinic Acid C4H low borderline
Oglu06G0023200.1 Rosmarinic Acid C4H low borderline
Oglu06G0023210.1 Rosmarinic Acid C4H medium pass
Oglu06G0025240.1 Rosmarinic Acid C4H low borderline
Oglu06G0025850.1 Rosmarinic Acid C4H low borderline
Oglu07G0006940.1 Rosmarinic Acid C4H low borderline