PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Oglu06G0010440.1 Flavonoid F3H medium borderline
Oglu06G0010440.2 Flavonoid F3H medium borderline
Oglu06G0020040.1 Flavonoid F3H medium borderline
Oglu06G0022430.1 Flavonoid F3H medium borderline
Oglu07G0000290.1 Flavonoid F3H low borderline
Oglu07G0003830.1 Flavonoid F3H medium pass
Oglu07G0010010.1 Flavonoid F3H low borderline
Oglu07G0010040.1 Flavonoid F3H medium borderline
Oglu07G0010060.1 Flavonoid F3H medium borderline
Oglu08G0008320.1 Flavonoid F3H low borderline
Oglu08G0008320.2 Flavonoid F3H low borderline
Oglu08G0014020.1 Flavonoid F3H medium borderline
Oglu08G0015170.1 Flavonoid F3H low borderline
Oglu08G0018830.1 Flavonoid F3H medium borderline
Oglu08G0018830.2 Flavonoid F3H medium borderline
Oglu08G0024680.1 Flavonoid F3H medium borderline
Oglu09G0002340.1 Flavonoid F3H low borderline
Oglu09G0002490.1 Flavonoid F3H low borderline
Oglu09G0002490.2 Flavonoid F3H low borderline
Oglu09G0002490.3 Flavonoid F3H low borderline
Oglu09G0002490.4 Flavonoid F3H low borderline
Oglu09G0007380.1 Flavonoid F3H medium borderline
Oglu09G0012610.1 Flavonoid F3H medium borderline
Oglu09G0012620.1 Flavonoid F3H medium borderline
Oglu09G0020740.1 Flavonoid F3H medium borderline
Oglu10G0015920.1 Flavonoid F3H low borderline
Oglu10G0015920.2 Flavonoid F3H low borderline
Oglu10G0015930.1 Flavonoid F3H low borderline
Oglu10G0015930.2 Flavonoid F3H low borderline
Oglu10G0016740.1 Flavonoid F3H medium borderline
Oglu10G0018110.1 Flavonoid F3H medium borderline
Oglu10G0018110.2 Flavonoid F3H medium borderline
Oglu10G0018120.1 Flavonoid F3H medium borderline
Oglu10G0018140.1 Flavonoid F3H medium borderline
Oglu10G0018170.1 Flavonoid F3H medium borderline
Oglu11G0005160.1 Flavonoid F3H medium borderline
Oglu11G0011700.1 Flavonoid F3H medium borderline
Oglu12G0018770.1 Flavonoid F3H medium borderline