PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
Reset
Gene Pathway Family Confidence Status
Oglu01G0006750.1 Flavonoid IFS low borderline
Oglu01G0006750.2 Flavonoid IFS low borderline
Oglu01G0007160.1 Flavonoid IFS medium borderline
Oglu01G0007940.1 Flavonoid IFS low borderline
Oglu01G0007960.1 Flavonoid IFS low borderline
Oglu01G0007970.1 Flavonoid IFS low borderline
Oglu01G0009100.1 Flavonoid IFS medium pass
Oglu01G0009110.1 Flavonoid IFS medium borderline
Oglu01G0009110.2 Flavonoid IFS medium borderline
Oglu01G0009120.1 Flavonoid IFS medium borderline
Oglu01G0018120.1 Flavonoid IFS medium borderline
Oglu01G0025250.1 Flavonoid IFS low borderline
Oglu01G0026910.1 Flavonoid IFS low borderline
Oglu01G0026920.1 Flavonoid IFS low borderline
Oglu01G0026930.1 Flavonoid IFS low borderline
Oglu01G0026940.4 Flavonoid IFS low borderline
Oglu01G0026960.1 Flavonoid IFS low borderline
Oglu01G0026960.2 Flavonoid IFS low borderline
Oglu01G0031400.1 Flavonoid IFS medium borderline
Oglu01G0033300.1 Flavonoid IFS low borderline
Oglu01G0038070.1 Flavonoid IFS low borderline
Oglu01G0038080.1 Flavonoid IFS low borderline
Oglu01G0038080.2 Flavonoid IFS low borderline
Oglu01G0038110.1 Flavonoid IFS low borderline
Oglu01G0038270.1 Flavonoid IFS low borderline
Oglu01G0041110.1 Flavonoid IFS low borderline
Oglu01G0041590.1 Flavonoid IFS low borderline
Oglu01G0047840.1 Flavonoid IFS low borderline
Oglu02G0006340.1 Flavonoid IFS low borderline
Oglu02G0006400.1 Flavonoid IFS medium pass
Oglu02G0006450.2 Flavonoid IFS medium borderline
Oglu02G0017490.1 Flavonoid IFS medium borderline
Oglu02G0017510.1 Flavonoid IFS medium borderline
Oglu02G0021290.1 Flavonoid IFS medium borderline
Oglu02G0027300.1 Flavonoid IFS low borderline
Oglu02G0029600.1 Flavonoid IFS low borderline
Oglu02G0038100.4 Flavonoid IFS low borderline
Oglu02G0038640.1 Flavonoid IFS low borderline
Oglu03G0000970.1 Flavonoid IFS medium borderline
Oglu03G0002920.1 Flavonoid IFS low borderline
Oglu03G0003030.1 Flavonoid IFS low borderline
Oglu03G0003040.1 Flavonoid IFS low borderline
Oglu03G0003060.1 Flavonoid IFS low borderline
Oglu03G0003070.1 Flavonoid IFS low borderline
Oglu03G0004910.1 Flavonoid IFS low borderline
Oglu03G0008920.1 Flavonoid IFS low borderline
Oglu03G0009240.1 Flavonoid IFS low borderline
Oglu03G0016350.1 Flavonoid IFS low borderline
Oglu03G0016350.3 Flavonoid IFS low borderline
Oglu03G0018890.1 Flavonoid IFS medium borderline