PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Oglu03G0019210.3 Flavonoid IFS low borderline
Oglu03G0019270.1 Flavonoid IFS low borderline
Oglu03G0023970.1 Flavonoid IFS medium borderline
Oglu03G0027230.1 Flavonoid IFS medium borderline
Oglu03G0028020.1 Flavonoid IFS medium borderline
Oglu03G0032920.1 Flavonoid IFS medium borderline
Oglu03G0034010.1 Flavonoid IFS medium borderline
Oglu04G0000030.1 Flavonoid IFS medium borderline
Oglu04G0001230.1 Flavonoid IFS medium borderline
Oglu04G0001290.1 Flavonoid IFS low borderline
Oglu04G0011060.1 Flavonoid IFS medium borderline
Oglu04G0015180.1 Flavonoid IFS low borderline
Oglu04G0015860.1 Flavonoid IFS medium borderline
Oglu04G0015920.1 Flavonoid IFS medium borderline
Oglu04G0021160.1 Flavonoid IFS low borderline
Oglu04G0021800.1 Flavonoid IFS low borderline
Oglu04G0021800.2 Flavonoid IFS low borderline
Oglu04G0022000.1 Flavonoid IFS low borderline
Oglu05G0000150.1 Flavonoid IFS low borderline
Oglu05G0006620.1 Flavonoid IFS low borderline
Oglu05G0013950.1 Flavonoid IFS medium borderline
Oglu05G0014720.1 Flavonoid IFS low borderline
Oglu05G0014720.2 Flavonoid IFS low borderline
Oglu05G0015300.1 Flavonoid IFS low borderline
Oglu05G0019130.1 Flavonoid IFS low borderline
Oglu05G0021460.1 Flavonoid IFS low borderline
Oglu05G0022280.1 Flavonoid IFS medium borderline
Oglu05G0023680.1 Flavonoid IFS medium borderline
Oglu06G0000050.1 Flavonoid IFS medium borderline
Oglu06G0001770.1 Flavonoid IFS low borderline
Oglu06G0006100.1 Flavonoid IFS low borderline
Oglu06G0006110.1 Flavonoid IFS low borderline
Oglu06G0016630.1 Flavonoid IFS medium borderline
Oglu06G0016630.2 Flavonoid IFS medium borderline
Oglu06G0019670.1 Flavonoid IFS low borderline
Oglu06G0020950.1 Flavonoid IFS low borderline
Oglu06G0022610.1 Flavonoid IFS medium borderline
Oglu06G0023130.1 Flavonoid IFS medium borderline
Oglu06G0023200.1 Flavonoid IFS medium borderline
Oglu06G0023210.1 Flavonoid IFS medium borderline
Oglu06G0025240.1 Flavonoid IFS medium borderline
Oglu07G0009480.1 Flavonoid IFS medium borderline
Oglu07G0009490.1 Flavonoid IFS medium borderline
Oglu07G0009540.1 Flavonoid IFS medium borderline
Oglu07G0011110.1 Flavonoid IFS low borderline
Oglu07G0012490.1 Flavonoid IFS low borderline
Oglu07G0012510.1 Flavonoid IFS low borderline
Oglu07G0015870.1 Flavonoid IFS low borderline
Oglu07G0015870.2 Flavonoid IFS low borderline
Oglu07G0015870.3 Flavonoid IFS low borderline