PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Oglu07G0015880.1 Flavonoid IFS low borderline
Oglu07G0015890.1 Flavonoid IFS low borderline
Oglu07G0015890.2 Flavonoid IFS low borderline
Oglu07G0015890.3 Flavonoid IFS low borderline
Oglu07G0015890.4 Flavonoid IFS low borderline
Oglu07G0015890.5 Flavonoid IFS low borderline
Oglu07G0015910.1 Flavonoid IFS low borderline
Oglu07G0015910.2 Flavonoid IFS low borderline
Oglu07G0023200.1 Flavonoid IFS low borderline
Oglu07G0023940.1 Flavonoid IFS low borderline
Oglu07G0026190.1 Flavonoid IFS low borderline
Oglu08G0000510.1 Flavonoid IFS medium borderline
Oglu08G0003080.1 Flavonoid IFS medium pass
Oglu08G0003090.1 Flavonoid IFS medium borderline
Oglu08G0006990.1 Flavonoid IFS medium borderline
Oglu08G0008650.1 Flavonoid IFS low borderline
Oglu08G0017470.1 Flavonoid IFS medium borderline
Oglu08G0017980.1 Flavonoid IFS medium borderline
Oglu08G0018340.1 Flavonoid IFS low borderline
Oglu08G0018340.2 Flavonoid IFS low borderline
Oglu08G0020660.1 Flavonoid IFS medium borderline
Oglu08G0023630.1 Flavonoid IFS medium borderline
Oglu09G0003360.1 Flavonoid IFS medium borderline
Oglu09G0003380.1 Flavonoid IFS medium borderline
Oglu09G0008780.1 Flavonoid IFS low borderline
Oglu09G0011960.1 Flavonoid IFS medium borderline
Oglu09G0011990.1 Flavonoid IFS medium borderline
Oglu09G0012390.1 Flavonoid IFS medium borderline
Oglu09G0013010.1 Flavonoid IFS low borderline
Oglu09G0017950.1 Flavonoid IFS low borderline
Oglu10G0003460.1 Flavonoid IFS medium borderline
Oglu10G0003520.1 Flavonoid IFS medium borderline
Oglu10G0003520.2 Flavonoid IFS medium borderline
Oglu10G0003990.1 Flavonoid IFS low borderline
Oglu10G0004160.1 Flavonoid IFS medium borderline
Oglu10G0005310.1 Flavonoid IFS medium borderline
Oglu10G0005390.1 Flavonoid IFS medium borderline
Oglu10G0008920.1 Flavonoid IFS low borderline
Oglu10G0013440.1 Flavonoid IFS low borderline
Oglu10G0015230.1 Flavonoid IFS medium borderline
Oglu10G0015320.1 Flavonoid IFS medium borderline
Oglu10G0015360.1 Flavonoid IFS medium pass
Oglu10G0015370.1 Flavonoid IFS low borderline
Oglu10G0015410.1 Flavonoid IFS medium borderline
Oglu11G0000970.1 Flavonoid IFS low borderline
Oglu11G0002020.1 Flavonoid IFS low borderline
Oglu11G0002380.1 Flavonoid IFS low borderline
Oglu11G0002900.1 Flavonoid IFS low borderline
Oglu11G0009330.1 Flavonoid IFS low borderline
Oglu11G0009330.2 Flavonoid IFS low borderline