PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Oglu02G0023250.1 Alkaloid T3O medium borderline
Oglu02G0027300.1 Alkaloid T3O low borderline
Oglu02G0029600.1 Alkaloid T3O medium pass
Oglu02G0038100.4 Alkaloid T3O medium pass
Oglu03G0000970.1 Alkaloid T3O medium borderline
Oglu03G0002920.1 Alkaloid T3O medium pass
Oglu03G0003030.1 Alkaloid T3O medium pass
Oglu03G0003040.1 Alkaloid T3O low borderline
Oglu03G0003060.1 Alkaloid T3O low borderline
Oglu03G0003070.1 Alkaloid T3O medium pass
Oglu03G0004910.1 Alkaloid T3O low borderline
Oglu03G0008920.1 Alkaloid T3O low borderline
Oglu03G0009240.1 Alkaloid T3O medium pass
Oglu03G0010320.1 Alkaloid T3O medium borderline
Oglu03G0010320.2 Alkaloid T3O medium borderline
Oglu03G0010330.1 Alkaloid T3O medium borderline
Oglu03G0016350.1 Alkaloid T3O medium pass
Oglu03G0016350.2 Alkaloid T3O medium pass
Oglu03G0016350.3 Alkaloid T3O medium pass
Oglu03G0023970.1 Alkaloid T3O medium borderline
Oglu03G0025340.1 Alkaloid T3O medium borderline
Oglu03G0025420.1 Alkaloid T3O medium borderline
Oglu03G0025430.1 Alkaloid T3O medium borderline
Oglu03G0025850.1 Alkaloid T3O medium pass
Oglu03G0027230.1 Alkaloid T3O medium borderline
Oglu03G0028530.1 Alkaloid T3O medium pass
Oglu03G0034750.1 Alkaloid T3O low borderline
Oglu03G0039510.1 Alkaloid T3O medium pass
Oglu03G0040390.1 Alkaloid T3O medium borderline
Oglu03G0040390.2 Alkaloid T3O medium borderline
Oglu04G0000030.1 Alkaloid T3O medium borderline
Oglu04G0002450.1 Alkaloid T3O medium borderline
Oglu04G0002540.1 Alkaloid T3O medium borderline
Oglu04G0015860.1 Alkaloid T3O medium borderline
Oglu04G0019750.1 Alkaloid T3O medium borderline
Oglu04G0021160.1 Alkaloid T3O low borderline
Oglu04G0021770.1 Alkaloid T3O medium pass
Oglu05G0000150.1 Alkaloid T3O low borderline
Oglu05G0005240.1 Alkaloid T3O medium pass
Oglu05G0006620.1 Alkaloid T3O medium pass
Oglu05G0007310.1 Alkaloid T3O medium pass
Oglu05G0015300.1 Alkaloid T3O low borderline
Oglu05G0017840.1 Alkaloid T3O medium borderline
Oglu05G0019130.1 Alkaloid T3O low borderline
Oglu05G0022280.1 Alkaloid T3O medium borderline
Oglu06G0000050.1 Alkaloid T3O medium borderline
Oglu06G0000530.1 Alkaloid T3O medium pass
Oglu06G0013790.1 Alkaloid T3O medium borderline
Oglu06G0013970.1 Alkaloid T3O medium borderline
Oglu06G0014930.1 Alkaloid T3O medium borderline