PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Oglu06G0016630.1 Alkaloid T3O medium borderline
Oglu06G0016630.2 Alkaloid T3O medium borderline
Oglu06G0019640.1 Alkaloid T3O medium pass
Oglu06G0021780.1 Alkaloid T3O medium borderline
Oglu06G0023130.1 Alkaloid T3O medium borderline
Oglu06G0023140.1 Alkaloid T3O medium borderline
Oglu06G0023150.1 Alkaloid T3O medium borderline
Oglu06G0023150.2 Alkaloid T3O medium borderline
Oglu06G0023190.1 Alkaloid T3O medium borderline
Oglu06G0023200.1 Alkaloid T3O medium borderline
Oglu06G0025240.1 Alkaloid T3O medium borderline
Oglu06G0025850.1 Alkaloid T3O medium pass
Oglu07G0006940.1 Alkaloid T3O medium borderline
Oglu07G0009540.1 Alkaloid T3O medium borderline
Oglu07G0012490.1 Alkaloid T3O medium pass
Oglu07G0013750.1 Alkaloid T3O medium pass
Oglu07G0015870.1 Alkaloid T3O medium pass
Oglu07G0015870.2 Alkaloid T3O medium pass
Oglu07G0015880.1 Alkaloid T3O medium pass
Oglu07G0015890.1 Alkaloid T3O low borderline
Oglu07G0015890.2 Alkaloid T3O medium pass
Oglu07G0015890.3 Alkaloid T3O low borderline
Oglu07G0015890.4 Alkaloid T3O low borderline
Oglu07G0015890.5 Alkaloid T3O medium pass
Oglu07G0015910.1 Alkaloid T3O medium pass
Oglu07G0015910.2 Alkaloid T3O medium pass
Oglu07G0015920.1 Alkaloid T3O medium pass
Oglu07G0021030.1 Alkaloid T3O medium borderline
Oglu08G0000460.1 Alkaloid T3O medium borderline
Oglu08G0000470.1 Alkaloid T3O medium borderline
Oglu08G0000480.1 Alkaloid T3O medium borderline
Oglu08G0000490.1 Alkaloid T3O medium borderline
Oglu08G0000500.1 Alkaloid T3O medium borderline
Oglu08G0000510.1 Alkaloid T3O medium borderline
Oglu08G0003090.1 Alkaloid T3O medium borderline
Oglu08G0006990.1 Alkaloid T3O medium borderline
Oglu08G0008650.1 Alkaloid T3O low borderline
Oglu08G0017470.1 Alkaloid T3O medium borderline
Oglu08G0020660.1 Alkaloid T3O medium borderline
Oglu08G0023630.1 Alkaloid T3O medium borderline
Oglu09G0003380.1 Alkaloid T3O medium borderline
Oglu09G0003980.1 Alkaloid T3O medium borderline
Oglu09G0011960.1 Alkaloid T3O medium borderline
Oglu09G0011990.1 Alkaloid T3O medium borderline
Oglu09G0012000.1 Alkaloid T3O medium borderline
Oglu09G0012390.1 Alkaloid T3O medium borderline
Oglu09G0012400.1 Alkaloid T3O medium borderline
Oglu10G0003430.1 Alkaloid T3O medium borderline
Oglu10G0003430.2 Alkaloid T3O medium borderline
Oglu10G0003520.1 Alkaloid T3O medium borderline