PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Oglu10G0003520.2 Alkaloid T3O medium borderline
Oglu10G0003520.3 Alkaloid T3O medium borderline
Oglu10G0003750.1 Alkaloid T3O medium borderline
Oglu10G0003770.1 Alkaloid T3O medium borderline
Oglu10G0003990.1 Alkaloid T3O medium pass
Oglu10G0004590.1 Alkaloid T3O medium borderline
Oglu10G0004590.2 Alkaloid T3O medium borderline
Oglu10G0007790.1 Alkaloid T3O medium pass
Oglu10G0007790.2 Alkaloid T3O medium pass
Oglu10G0008910.1 Alkaloid T3O medium borderline
Oglu10G0010930.1 Alkaloid T3O medium pass
Oglu10G0010940.1 Alkaloid T3O medium borderline
Oglu10G0011990.1 Alkaloid T3O medium pass
Oglu10G0013440.1 Alkaloid T3O medium pass
Oglu10G0015170.1 Alkaloid T3O medium borderline
Oglu10G0015230.1 Alkaloid T3O medium borderline
Oglu10G0015320.1 Alkaloid T3O medium borderline
Oglu10G0015360.1 Alkaloid T3O medium pass
Oglu10G0016050.1 Alkaloid T3O medium pass
Oglu10G0016060.1 Alkaloid T3O medium pass
Oglu10G0016330.1 Alkaloid T3O low borderline
Oglu11G0002380.1 Alkaloid T3O medium pass
Oglu11G0002900.1 Alkaloid T3O low borderline
Oglu11G0012760.1 Alkaloid T3O medium borderline
Oglu11G0019790.1 Alkaloid T3O medium borderline
Oglu12G0001550.4 Alkaloid T3O medium borderline
Oglu12G0001560.1 Alkaloid T3O medium pass
Oglu12G0003020.1 Alkaloid T3O medium pass
Oglu12G0006890.1 Alkaloid T3O medium pass
Oglu12G0009240.1 Alkaloid T3O medium borderline
Oglu12G0009990.1 Alkaloid T3O low borderline
Oglu12G0015000.1 Alkaloid T3O medium borderline
Oglu12G0018410.1 Alkaloid T3O medium borderline
Oglu12G0018420.1 Alkaloid T3O medium borderline
Oglu12G0021710.1 Alkaloid T3O medium borderline