Oryza glumaepatula (oryza_glumaepatula)
Imported from atlas release summary for Oryza glumaepatula.
1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1971
Candidate Genes
C4H
6.44%
C3'H/CYP98A
6.08%
BAHD
5.88%
UGT
4.31%
7DLGT
3.98%
UFGT
3.79%
T3O
3.56%
CYP76
3.38%
Other Families
62.58%
More Families (97)
4CL
168
3.23%
IFS
160
3.08%
F3'H/CYP75B
142
2.73%
POD
140
2.69%
NMT
122
2.35%
BR6OX2/CYP85A2
111
2.13%
DWF4/CYP90B1
109
2.1%
STR
100
1.92%
CYP71
91
1.75%
F3H
88
1.69%
CAD
79
1.52%
SMT1/SMT2/SMT3
77
1.48%
CAS
77
1.48%
TPS
74
1.42%
GES
64
1.23%
TRI/TRII
59
1.13%
CODM/T6ODM
55
1.06%
PYKS
55
1.06%
SGD
54
1.04%
G8O/G8H
53
1.02%
IFR
52
1.0%
CCR
52
1.0%
COMT
51
0.98%
FNS
47
0.9%
CSE
47
0.9%
T16H
45
0.87%
SLS
41
0.79%
RAS
41
0.79%
PMT
40
0.77%
ANR
40
0.77%
16OMT
39
0.75%
LAC
38
0.73%
CYP90D1
38
0.73%
GS
37
0.71%
H6H
36
0.69%
F5H/CYP84A
35
0.67%
HCT
34
0.65%
CYP51G1
33
0.63%
CHS
32
0.62%
NCS
31
0.6%
DFR
30
0.58%
PAL
27
0.52%
F3'5'H/CYP75A
26
0.5%
CPD/CYP90A1
26
0.5%
BR6OX1/CYP85A1
25
0.48%
IO
23
0.44%
8HGO
23
0.44%
ANS/LDOX
22
0.42%
7DLH
20
0.38%
COR
20
0.38%
CNMT
18
0.35%
BBE
18
0.35%
XMT_MXMT_DXMT
16
0.31%
LAMT
15
0.29%
FPPS
15
0.29%
TAT
14
0.27%
CPR
14
0.27%
ROT3/CYP90C1
14
0.27%
CYP80B1
11
0.21%
MVK
11
0.21%
GGPPS
10
0.19%
CYP719
9
0.17%
HPPR
9
0.17%
HYD1
9
0.17%
SQS/FDFT1
9
0.17%
MPO
8
0.15%
CCoAOMT
8
0.15%
MVD
8
0.15%
TYDC_DDC
7
0.13%
6OMT_4OMT_SOMT
7
0.13%
AACT
7
0.13%
MCT/IspD
7
0.13%
CYP80F1
6
0.12%
CHI
6
0.12%
ISY
5
0.1%
ADC
5
0.1%
FK
5
0.1%
SMO1/SMO2
5
0.1%
ODC
4
0.08%
DET2
4
0.08%
HMGR
4
0.08%
PMK
4
0.08%
DXS
4
0.08%
TDC
3
0.06%
FLS
3
0.06%
SQE
3
0.06%
DWF1
3
0.06%
IDI
3
0.06%
DWF5
2
0.04%
DXR
2
0.04%
CMK/IspE
2
0.04%
MDS/IspF
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
DWF7
1
0.02%
CPI1
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 585 | 19 | BAHD (210) | View species results |
| Alkaloid pathway | 460 | 24 | 7DLGT (86) | View species results |
| Flavonoid pathway | 313 | 13 | UFGT (179) | View species results |
| Phenylpropanoid pathway | 312 | 13 | POD (108) | View species results |
| Rosmarinic acid pathway | 165 | 7 | C4H (86) | View species results |
| Steroid pathway | 136 | 13 | CAS (53) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2030 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 381 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Oglu04G0020820.1 | Terpenoid | UGT | low | borderline | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Oglu04G0020840.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Oglu04G0020860.1 | Terpenoid | UGT | low | borderline | UGT__00106__sp_Q9SKC5_U74D1_ARATH |
| Oglu04G0021490.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Oglu04G0021500.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Oglu04G0027120.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu05G0004910.1 | Terpenoid | UGT | medium | pass | UGT__00043__sp_K4GHS2_73C13_BARVU |
| Oglu05G0004960.1 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Oglu05G0005130.1 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Oglu05G0007540.1 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Oglu05G0022240.1 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Oglu05G0022680.1 | Terpenoid | UGT | low | borderline | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Oglu05G0022690.1 | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Oglu05G0024470.1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Oglu05G0024480.1 | Terpenoid | UGT | medium | pass | UGT__00002__sp_A0A067YBQ3_UGT13_PUEML |
| Oglu05G0024490.1 | Terpenoid | UGT | medium | pass | UGT__00002__sp_A0A067YBQ3_UGT13_PUEML |
| Oglu05G0024500.1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Oglu05G0024520.1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Oglu05G0024530.1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Oglu05G0024540.1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Oglu05G0024540.2 | Terpenoid | UGT | low | borderline | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Oglu05G0026270.1 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| Oglu06G0005860.1 | Terpenoid | UGT | low | borderline | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Oglu06G0005870.1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Oglu06G0006130.1 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| Oglu06G0007420.1 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Oglu06G0007710.1 | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| Oglu06G0007710.2 | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| Oglu06G0008100.1 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Oglu06G0011210.1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Oglu06G0011600.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu06G0011610.1 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| Oglu06G0011620.1 | Terpenoid | UGT | low | borderline | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu06G0011640.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu06G0011670.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu06G0011680.1 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Oglu06G0012010.1 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Oglu06G0012060.1 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Oglu06G0012070.1 | Terpenoid | UGT | low | borderline | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| Oglu06G0012080.1 | Terpenoid | UGT | medium | pass | UGT__00004__sp_A0A096SRM5_708A6_MAIZE |
| Oglu06G0012090.1 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Oglu06G0012130.1 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Oglu06G0012140.1 | Terpenoid | UGT | medium | pass | UGT__00004__sp_A0A096SRM5_708A6_MAIZE |
| Oglu06G0012150.1 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Oglu06G0012160.1 | Terpenoid | UGT | medium | pass | UGT__00004__sp_A0A096SRM5_708A6_MAIZE |
| Oglu06G0014630.1 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Oglu06G0019590.1 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Oglu06G0019590.2 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Oglu06G0020590.1 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Oglu06G0020600.1 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |