PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu12G0009240.1 Alkaloid T3O medium borderline
Oglu12G0009990.1 Alkaloid T3O low borderline
Oglu12G0015000.1 Alkaloid T3O medium borderline
Oglu12G0018410.1 Alkaloid T3O medium borderline
Oglu12G0018420.1 Alkaloid T3O medium borderline
Oglu12G0021710.1 Alkaloid T3O medium borderline
Oglu02G0019680.1 Alkaloid TDC low borderline
Oglu08G0002540.1 Alkaloid TDC medium borderline
Oglu10G0000300.1 Alkaloid TDC low borderline
Oglu01G0020090.1 Alkaloid TRI/TRII low borderline
Oglu01G0046590.1 Alkaloid TRI/TRII medium pass
Oglu02G0017540.1 Alkaloid TRI/TRII medium pass
Oglu02G0025740.1 Alkaloid TRI/TRII low borderline
Oglu03G0011800.1 Alkaloid TRI/TRII medium pass
Oglu03G0011810.1 Alkaloid TRI/TRII medium pass
Oglu03G0011820.1 Alkaloid TRI/TRII medium pass
Oglu03G0014060.1 Alkaloid TRI/TRII medium pass
Oglu03G0028270.1 Alkaloid TRI/TRII low borderline
Oglu03G0033430.1 Alkaloid TRI/TRII low borderline
Oglu03G0037760.1 Alkaloid TRI/TRII medium pass
Oglu03G0037760.2 Alkaloid TRI/TRII medium pass
Oglu03G0039340.1 Alkaloid TRI/TRII medium pass
Oglu04G0002470.1 Alkaloid TRI/TRII medium pass
Oglu04G0002490.1 Alkaloid TRI/TRII medium pass
Oglu04G0002500.1 Alkaloid TRI/TRII medium pass
Oglu04G0002510.1 Alkaloid TRI/TRII medium pass
Oglu04G0005410.1 Alkaloid TRI/TRII medium pass
Oglu04G0005410.2 Alkaloid TRI/TRII medium pass
Oglu04G0009140.1 Alkaloid TRI/TRII medium pass
Oglu04G0010930.1 Alkaloid TRI/TRII medium pass
Oglu04G0014280.1 Alkaloid TRI/TRII low borderline
Oglu04G0019190.1 Alkaloid TRI/TRII low borderline
Oglu05G0002690.1 Alkaloid TRI/TRII low borderline
Oglu06G0005680.1 Alkaloid TRI/TRII low borderline
Oglu07G0018190.1 Alkaloid TRI/TRII medium pass
Oglu07G0020330.1 Alkaloid TRI/TRII medium pass
Oglu07G0025090.1 Alkaloid TRI/TRII medium pass
Oglu07G0025090.2 Alkaloid TRI/TRII low borderline
Oglu07G0025090.3 Alkaloid TRI/TRII low borderline
Oglu07G0025090.4 Alkaloid TRI/TRII low borderline
Oglu07G0025100.1 Alkaloid TRI/TRII low borderline
Oglu07G0025100.2 Alkaloid TRI/TRII low borderline
Oglu07G0025110.1 Alkaloid TRI/TRII medium pass
Oglu07G0025120.1 Alkaloid TRI/TRII low borderline
Oglu07G0025130.1 Alkaloid TRI/TRII medium pass
Oglu07G0025140.1 Alkaloid TRI/TRII low borderline
Oglu07G0025150.1 Alkaloid TRI/TRII medium pass
Oglu07G0025160.1 Alkaloid TRI/TRII low borderline
Oglu07G0025180.1 Alkaloid TRI/TRII low borderline
Oglu07G0026860.1 Alkaloid TRI/TRII medium pass