PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu09G0001890.1 Alkaloid TRI/TRII medium pass
Oglu09G0013150.1 Alkaloid TRI/TRII low borderline
Oglu09G0013150.2 Alkaloid TRI/TRII medium borderline
Oglu09G0013150.3 Alkaloid TRI/TRII medium borderline
Oglu10G0011700.1 Alkaloid TRI/TRII medium pass
Oglu11G0008700.1 Alkaloid TRI/TRII low borderline
Oglu11G0011560.1 Alkaloid TRI/TRII medium pass
Oglu11G0011780.1 Alkaloid TRI/TRII medium pass
Oglu11G0011800.1 Alkaloid TRI/TRII low borderline
Oglu11G0011800.2 Alkaloid TRI/TRII low borderline
Oglu11G0011800.3 Alkaloid TRI/TRII low borderline
Oglu11G0011800.4 Alkaloid TRI/TRII low borderline
Oglu11G0011800.5 Alkaloid TRI/TRII medium pass
Oglu11G0011800.6 Alkaloid TRI/TRII medium pass
Oglu11G0011800.7 Alkaloid TRI/TRII medium pass
Oglu11G0014460.1 Alkaloid TRI/TRII medium pass
Oglu11G0020580.1 Alkaloid TRI/TRII medium pass
Oglu12G0008920.1 Alkaloid TRI/TRII medium pass
Oglu01G0036150.1 Alkaloid TYDC_DDC medium borderline
Oglu03G0016250.1 Alkaloid TYDC_DDC low borderline
Oglu05G0023320.1 Alkaloid TYDC_DDC medium borderline
Oglu07G0011750.1 Alkaloid TYDC_DDC medium borderline
Oglu08G0002550.1 Alkaloid TYDC_DDC medium borderline
Oglu10G0007910.1 Alkaloid TYDC_DDC medium borderline
Oglu10G0008780.1 Alkaloid TYDC_DDC medium borderline
Oglu01G0031440.2 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu03G0018750.1 Alkaloid XMT_MXMT_DXMT low borderline
Oglu04G0020960.1 Alkaloid XMT_MXMT_DXMT low borderline
Oglu06G0009510.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0009520.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0009610.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0009610.2 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0009610.3 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0009650.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0013170.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0013200.1 Alkaloid XMT_MXMT_DXMT low borderline
Oglu06G0013270.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu06G0013620.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu11G0008320.1 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu11G0008320.2 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu11G0008320.3 Alkaloid XMT_MXMT_DXMT medium borderline
Oglu01G0015950.1 Flavonoid 4CL medium pass
Oglu01G0016710.1 Flavonoid 4CL medium pass
Oglu01G0027420.1 Flavonoid 4CL low borderline
Oglu01G0028560.1 Flavonoid 4CL low borderline
Oglu01G0030170.1 Flavonoid 4CL low borderline
Oglu01G0035530.1 Flavonoid 4CL low borderline
Oglu01G0044420.1 Flavonoid 4CL medium pass
Oglu01G0044420.2 Flavonoid 4CL low borderline
Oglu01G0044420.3 Flavonoid 4CL low borderline