PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

1971
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Oglu05G0024470.1 Alkaloid 7DLGT medium pass
Oglu05G0024480.1 Alkaloid 7DLGT low borderline
Oglu05G0024490.1 Alkaloid 7DLGT medium pass
Oglu05G0024500.1 Alkaloid 7DLGT medium pass
Oglu05G0024520.1 Alkaloid 7DLGT medium pass
Oglu05G0024530.1 Alkaloid 7DLGT medium pass
Oglu05G0024540.1 Alkaloid 7DLGT low borderline
Oglu05G0024540.2 Alkaloid 7DLGT low borderline
Oglu05G0026270.1 Alkaloid 7DLGT low borderline
Oglu06G0005860.1 Alkaloid 7DLGT low borderline
Oglu06G0005870.1 Alkaloid 7DLGT low borderline
Oglu06G0006130.1 Alkaloid 7DLGT medium pass
Oglu06G0007420.1 Alkaloid 7DLGT low borderline
Oglu06G0007710.1 Alkaloid 7DLGT low borderline
Oglu06G0007710.2 Alkaloid 7DLGT low borderline
Oglu06G0008100.1 Alkaloid 7DLGT medium pass
Oglu06G0011210.1 Alkaloid 7DLGT low borderline
Oglu06G0011600.1 Alkaloid 7DLGT low borderline
Oglu06G0011610.1 Alkaloid 7DLGT low borderline
Oglu06G0011620.1 Alkaloid 7DLGT low borderline
Oglu06G0011640.1 Alkaloid 7DLGT low borderline
Oglu06G0011670.1 Alkaloid 7DLGT low borderline
Oglu06G0011680.1 Alkaloid 7DLGT low borderline
Oglu06G0012010.1 Alkaloid 7DLGT medium pass
Oglu06G0012060.1 Alkaloid 7DLGT medium pass
Oglu06G0012070.1 Alkaloid 7DLGT low borderline
Oglu06G0012080.1 Alkaloid 7DLGT medium pass
Oglu06G0012090.1 Alkaloid 7DLGT low borderline
Oglu06G0012130.1 Alkaloid 7DLGT low borderline
Oglu06G0012140.1 Alkaloid 7DLGT low borderline
Oglu06G0012150.1 Alkaloid 7DLGT low borderline
Oglu06G0012160.1 Alkaloid 7DLGT medium pass
Oglu06G0014630.1 Alkaloid 7DLGT medium pass
Oglu06G0020590.1 Alkaloid 7DLGT low borderline
Oglu06G0020600.1 Alkaloid 7DLGT low borderline
Oglu06G0020670.1 Alkaloid 7DLGT low borderline
Oglu06G0020680.1 Alkaloid 7DLGT low borderline
Oglu07G0002320.1 Alkaloid 7DLGT medium pass
Oglu07G0006080.1 Alkaloid 7DLGT low borderline
Oglu07G0006100.1 Alkaloid 7DLGT low borderline
Oglu07G0006110.1 Alkaloid 7DLGT low borderline
Oglu07G0006130.1 Alkaloid 7DLGT low borderline
Oglu07G0006140.1 Alkaloid 7DLGT low borderline
Oglu07G0007510.1 Alkaloid 7DLGT medium pass
Oglu07G0007520.1 Alkaloid 7DLGT high pass
Oglu07G0007540.1 Alkaloid 7DLGT medium pass
Oglu07G0007550.1 Alkaloid 7DLGT medium pass
Oglu07G0007560.1 Alkaloid 7DLGT medium pass
Oglu07G0007660.1 Alkaloid 7DLGT medium pass
Oglu07G0007990.1 Alkaloid 7DLGT medium pass