PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Oglu10G0003420.1 Rosmarinic Acid C4H low borderline
Oglu10G0003430.1 Rosmarinic Acid C4H medium pass
Oglu10G0003430.2 Rosmarinic Acid C4H medium pass
Oglu10G0003460.1 Rosmarinic Acid C4H medium pass
Oglu10G0003470.1 Rosmarinic Acid C4H low borderline
Oglu10G0003500.1 Rosmarinic Acid C4H low borderline
Oglu10G0003520.1 Rosmarinic Acid C4H low borderline
Oglu10G0003520.2 Rosmarinic Acid C4H low borderline
Oglu10G0003520.3 Rosmarinic Acid C4H medium pass
Oglu10G0003750.1 Rosmarinic Acid C4H medium pass
Oglu10G0003770.1 Rosmarinic Acid C4H medium pass
Oglu10G0003990.1 Rosmarinic Acid C4H low borderline
Oglu10G0004160.1 Rosmarinic Acid C4H medium pass
Oglu10G0004590.1 Rosmarinic Acid C4H medium pass
Oglu10G0004590.2 Rosmarinic Acid C4H medium pass
Oglu10G0005310.1 Rosmarinic Acid C4H low borderline
Oglu10G0005390.1 Rosmarinic Acid C4H low borderline
Oglu10G0007790.1 Rosmarinic Acid C4H low borderline
Oglu10G0007790.2 Rosmarinic Acid C4H low borderline
Oglu10G0008910.1 Rosmarinic Acid C4H medium pass
Oglu10G0008920.1 Rosmarinic Acid C4H low borderline
Oglu10G0010930.1 Rosmarinic Acid C4H low borderline
Oglu10G0010940.1 Rosmarinic Acid C4H medium pass
Oglu10G0011990.1 Rosmarinic Acid C4H low borderline
Oglu10G0015090.1 Rosmarinic Acid C4H low borderline
Oglu10G0015170.1 Rosmarinic Acid C4H medium pass
Oglu10G0015230.1 Rosmarinic Acid C4H low borderline
Oglu10G0015250.1 Rosmarinic Acid C4H low borderline
Oglu10G0015260.1 Rosmarinic Acid C4H medium pass
Oglu10G0015270.1 Rosmarinic Acid C4H low borderline
Oglu10G0015330.1 Rosmarinic Acid C4H low borderline
Oglu10G0015350.1 Rosmarinic Acid C4H low borderline
Oglu10G0015360.1 Rosmarinic Acid C4H low borderline
Oglu10G0015370.1 Rosmarinic Acid C4H low borderline
Oglu10G0015390.1 Rosmarinic Acid C4H low borderline
Oglu10G0015400.1 Rosmarinic Acid C4H medium pass
Oglu10G0015410.1 Rosmarinic Acid C4H low borderline
Oglu10G0016040.1 Rosmarinic Acid C4H low borderline
Oglu10G0016050.1 Rosmarinic Acid C4H low borderline
Oglu10G0016060.1 Rosmarinic Acid C4H low borderline
Oglu10G0016330.1 Rosmarinic Acid C4H low borderline
Oglu11G0000940.1 Rosmarinic Acid C4H low borderline
Oglu11G0000970.1 Rosmarinic Acid C4H low borderline
Oglu11G0002020.1 Rosmarinic Acid C4H low borderline
Oglu11G0002380.1 Rosmarinic Acid C4H low borderline
Oglu11G0012720.1 Rosmarinic Acid C4H low borderline
Oglu11G0012760.1 Rosmarinic Acid C4H medium pass
Oglu11G0013130.1 Rosmarinic Acid C4H low borderline
Oglu11G0019790.1 Rosmarinic Acid C4H medium pass
Oglu12G0000130.1 Rosmarinic Acid C4H low borderline