PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu10G0015090.1 Terpenoid CYP76 low borderline
Oglu10G0015170.1 Terpenoid CYP76 medium borderline
Oglu10G0015230.1 Terpenoid CYP76 medium pass
Oglu10G0015250.1 Terpenoid CYP76 low borderline
Oglu10G0015260.1 Terpenoid CYP76 medium pass
Oglu10G0015270.1 Terpenoid CYP76 medium pass
Oglu10G0015320.1 Terpenoid CYP76 low borderline
Oglu10G0015350.1 Terpenoid CYP76 medium pass
Oglu10G0015360.1 Terpenoid CYP76 medium pass
Oglu10G0015370.1 Terpenoid CYP76 low borderline
Oglu10G0015390.1 Terpenoid CYP76 low borderline
Oglu10G0015400.1 Terpenoid CYP76 medium pass
Oglu10G0015410.1 Terpenoid CYP76 low borderline
Oglu10G0016040.1 Terpenoid CYP76 low borderline
Oglu10G0016050.1 Terpenoid CYP76 low borderline
Oglu11G0009330.1 Terpenoid CYP76 low borderline
Oglu11G0009330.2 Terpenoid CYP76 low borderline
Oglu11G0009330.3 Terpenoid CYP76 low borderline
Oglu11G0012720.1 Terpenoid CYP76 low borderline
Oglu11G0013130.1 Terpenoid CYP76 medium borderline
Oglu11G0014590.1 Terpenoid CYP76 low borderline
Oglu11G0014590.2 Terpenoid CYP76 low borderline
Oglu12G0000130.1 Terpenoid CYP76 low borderline
Oglu12G0006320.1 Terpenoid CYP76 medium pass
Oglu12G0009240.1 Terpenoid CYP76 medium borderline
Oglu12G0018400.1 Terpenoid CYP76 low borderline
Oglu12G0018410.1 Terpenoid CYP76 medium borderline
Oglu12G0018420.1 Terpenoid CYP76 medium pass
Oglu01G0000520.1 Terpenoid DXR high pass
Oglu01G0014660.2 Terpenoid DXR low borderline
Oglu05G0016870.1 Terpenoid DXS medium pass
Oglu06G0002780.1 Terpenoid DXS medium pass
Oglu06G0002780.2 Terpenoid DXS medium pass
Oglu07G0005300.1 Terpenoid DXS medium pass
Oglu01G0031070.1 Terpenoid FPPS low borderline
Oglu01G0031510.1 Terpenoid FPPS medium pass
Oglu01G0031510.2 Terpenoid FPPS medium pass
Oglu01G0041480.1 Terpenoid FPPS medium pass
Oglu02G0038450.1 Terpenoid FPPS low borderline
Oglu02G0038450.2 Terpenoid FPPS low borderline
Oglu04G0027520.1 Terpenoid FPPS medium pass
Oglu04G0027520.2 Terpenoid FPPS medium pass
Oglu04G0027520.3 Terpenoid FPPS medium pass
Oglu04G0027530.1 Terpenoid FPPS medium pass
Oglu05G0008480.1 Terpenoid FPPS medium pass
Oglu05G0025570.1 Terpenoid FPPS medium pass
Oglu06G0004600.1 Terpenoid FPPS medium pass
Oglu06G0004600.2 Terpenoid FPPS medium pass
Oglu07G0021340.1 Terpenoid FPPS medium pass
Oglu01G0010660.1 Terpenoid GGPPS medium borderline