PlantSME Plant secondary metabolism enzyme database

Oryza glumaepatula (oryza_glumaepatula)

Imported from atlas release summary for Oryza glumaepatula.

2450
Candidate Protein Records
1971
Pathway-Level Records
5201
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 585 19 BAHD (210) View species results
Alkaloid pathway 460 24 7DLGT (86) View species results
Flavonoid pathway 313 13 UFGT (179) View species results
Phenylpropanoid pathway 312 13 POD (108) View species results
Rosmarinic acid pathway 165 7 C4H (86) View species results
Steroid pathway 136 13 CAS (53) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2030 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 381 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Oglu05G0028340.1 Terpenoid GGPPS medium borderline
Oglu06G0025670.1 Terpenoid GGPPS medium borderline
Oglu07G0019510.1 Terpenoid GGPPS medium borderline
Oglu08G0005670.1 Terpenoid GGPPS medium borderline
Oglu08G0005670.2 Terpenoid GGPPS medium borderline
Oglu08G0005670.3 Terpenoid GGPPS medium borderline
Oglu08G0005670.4 Terpenoid GGPPS medium borderline
Oglu12G0009360.1 Terpenoid GGPPS medium borderline
Oglu12G0009360.2 Terpenoid GGPPS medium borderline
Oglu03G0032290.1 Terpenoid HDR/IspH high pass
Oglu03G0032300.1 Terpenoid HDR/IspH high pass
Oglu02G0023310.1 Terpenoid HDS/IspG high pass
Oglu02G0015120.1 Terpenoid HMGR low borderline
Oglu02G0030340.1 Terpenoid HMGR medium pass
Oglu08G0021150.1 Terpenoid HMGR medium pass
Oglu09G0015360.1 Terpenoid HMGR medium pass
Oglu03G0001430.1 Terpenoid HMGS high pass
Oglu09G0017140.1 Terpenoid HMGS high pass
Oglu03G0036750.1 Terpenoid IDI low borderline
Oglu05G0017180.1 Terpenoid IDI medium pass
Oglu07G0017210.1 Terpenoid IDI medium pass
Oglu01G0043540.1 Terpenoid MCT/IspD high pass
Oglu01G0043540.2 Terpenoid MCT/IspD high pass
Oglu01G0043540.3 Terpenoid MCT/IspD high pass
Oglu01G0043540.4 Terpenoid MCT/IspD high pass
Oglu04G0024660.1 Terpenoid MCT/IspD low borderline
Oglu04G0024660.3 Terpenoid MCT/IspD low borderline
Oglu11G0017570.1 Terpenoid MCT/IspD low borderline
Oglu01G0049270.1 Terpenoid MDS/IspF low borderline
Oglu02G0028150.1 Terpenoid MDS/IspF high pass
Oglu02G0000630.1 Terpenoid MVD medium pass
Oglu02G0000630.2 Terpenoid MVD medium pass
Oglu02G0000640.1 Terpenoid MVD medium pass
Oglu02G0000640.2 Terpenoid MVD medium pass
Oglu02G0000640.3 Terpenoid MVD medium pass
Oglu02G0000640.4 Terpenoid MVD medium pass
Oglu07G0021980.1 Terpenoid MVD low borderline
Oglu11G0017920.1 Terpenoid MVD low borderline
Oglu03G0001160.1 Terpenoid MVK low borderline
Oglu03G0039310.1 Terpenoid MVK low borderline
Oglu04G0029960.1 Terpenoid MVK low borderline
Oglu06G0003390.2 Terpenoid MVK low borderline
Oglu08G0004520.1 Terpenoid MVK medium pass
Oglu08G0004520.2 Terpenoid MVK medium pass
Oglu10G0005760.1 Terpenoid MVK medium pass
Oglu10G0005760.2 Terpenoid MVK medium pass
Oglu10G0005760.3 Terpenoid MVK medium pass
Oglu10G0005760.4 Terpenoid MVK medium pass
Oglu10G0005760.5 Terpenoid MVK medium pass
Oglu03G0010620.1 Terpenoid PMK medium pass