PlantSME Plant secondary metabolism enzyme database

Oryza rufipogon (oryza_rufipogon)

Imported from atlas release summary for Oryza rufipogon.

2369
Candidate Protein Records
1852
Pathway-Level Records
5015
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 19 BAHD (205) View species results
Alkaloid pathway 450 23 7DLGT (73) View species results
Flavonoid pathway 296 14 UFGT (175) View species results
Phenylpropanoid pathway 291 12 POD (92) View species results
Rosmarinic acid pathway 149 7 C4H (69) View species results
Steroid pathway 133 13 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1945 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 371 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
Reset
Protein/Isoform Record Pathway Family Confidence Status
Oruf10G0003650.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0004070.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0004070.2 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0004660.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0005020.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0006560.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0009550.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0011740.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0014510.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0016270.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0017260.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0017270.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf10G0017280.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf11G0013700.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf11G0013780.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf11G0014590.1 Steroid BR6OX2/CYP85A2 medium borderline
Oruf12G0014790.1 Steroid BR6OX2/CYP85A2 low borderline
Oruf12G0022410.1 Steroid BR6OX2/CYP85A2 low borderline