PlantSME Plant secondary metabolism enzyme database

Oryza rufipogon (oryza_rufipogon)

Imported from atlas release summary for Oryza rufipogon.

2369
Candidate Protein Records
1852
Pathway-Level Records
5015
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 19 BAHD (205) View species results
Alkaloid pathway 450 23 7DLGT (73) View species results
Flavonoid pathway 296 14 UFGT (175) View species results
Phenylpropanoid pathway 291 12 POD (92) View species results
Rosmarinic acid pathway 149 7 C4H (69) View species results
Steroid pathway 133 13 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1945 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 371 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Oruf04G0003500.1 Terpenoid TPS medium pass
Oruf04G0003500.2 Terpenoid TPS medium pass
Oruf04G0003560.1 Terpenoid TPS medium pass
Oruf04G0008940.1 Terpenoid TPS medium pass
Oruf04G0008950.1 Terpenoid TPS medium pass
Oruf04G0008990.1 Terpenoid TPS medium pass
Oruf04G0009030.1 Terpenoid TPS medium pass
Oruf04G0009080.1 Terpenoid TPS medium pass
Oruf04G0009110.1 Terpenoid TPS medium pass
Oruf04G0009140.1 Terpenoid TPS medium pass
Oruf04G0009160.1 Terpenoid TPS medium pass
Oruf04G0009170.1 Terpenoid TPS medium pass
Oruf04G0009190.1 Terpenoid TPS medium pass
Oruf04G0009200.1 Terpenoid TPS medium pass
Oruf04G0026420.1 Terpenoid TPS low borderline
Oruf04G0026420.2 Terpenoid TPS low borderline
Oruf05G0009760.1 Terpenoid TPS medium pass
Oruf05G0011690.1 Terpenoid TPS medium pass
Oruf05G0011690.2 Terpenoid TPS medium pass
Oruf06G0015260.1 Terpenoid TPS medium pass
Oruf07G0006720.1 Terpenoid TPS low borderline
Oruf08G0002740.1 Terpenoid TPS medium pass
Oruf08G0004530.1 Terpenoid TPS medium pass
Oruf08G0004530.2 Terpenoid TPS low borderline
Oruf08G0004530.3 Terpenoid TPS low borderline
Oruf08G0004530.4 Terpenoid TPS low borderline
Oruf08G0004530.5 Terpenoid TPS low borderline
Oruf08G0004530.6 Terpenoid TPS medium pass
Oruf09G0005770.1 Terpenoid TPS medium pass
Oruf09G0005780.1 Terpenoid TPS low borderline
Oruf10G0014770.1 Terpenoid TPS medium pass
Oruf11G0014060.1 Terpenoid TPS low borderline
Oruf11G0014080.1 Terpenoid TPS medium pass
Oruf12G0013620.1 Terpenoid TPS medium pass
Oruf12G0013630.1 Terpenoid TPS medium pass
Oruf12G0015000.1 Terpenoid TPS medium pass
Oruf01G0005150.1 Terpenoid UGT medium pass
Oruf01G0005160.1 Terpenoid UGT low borderline
Oruf01G0005160.2 Terpenoid UGT low borderline
Oruf01G0005460.1 Terpenoid UGT medium pass
Oruf01G0008370.1 Terpenoid UGT low borderline
Oruf01G0024060.1 Terpenoid UGT medium pass
Oruf01G0025580.1 Terpenoid UGT medium pass
Oruf01G0025590.1 Terpenoid UGT medium pass
Oruf01G0025600.1 Terpenoid UGT medium pass
Oruf01G0026660.1 Terpenoid UGT medium pass
Oruf01G0026690.1 Terpenoid UGT medium pass
Oruf01G0029650.1 Terpenoid UGT low borderline
Oruf01G0029850.1 Terpenoid UGT low borderline
Oruf01G0030380.1 Terpenoid UGT medium pass